RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 HMGN2P46Q86SG4 172 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 POU5F2Q8N7G0 328 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 ANKS4BQ8N8V4 417 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 FAM57AQ8TBR7 257 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 PMM1Q92871 262 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SNF8-212ENST00000514089 MAL2Q969L2 176 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 LRRC58Q96CX6 371 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 ANKRD27Q96NW4 1050 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 RTN4RQ9BZR6 473 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 UBQLN3Q9H347 655 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 LIPGQ9Y5X9 500 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 DOCK10Q96BY6 2186 aa13.22□□□□□ -0.29
SNF8-212ENST00000514089 A0A087WZY1 265 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 A0A0G2JPF8 293 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 A0A1B0GVC2 190 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 FBP2O00757 339 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 KIAA0513O60268 411 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
SNF8-212ENST00000514089 FAM107AO95990 144 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 ACTL6AO96019 429 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 DBIP07108 87 aaKnown RBP13.21□□□□□ -0.29
SNF8-212ENST00000514089 CHRM4P08173 479 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 NUDT7P0C024 238 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 TFPTP0C1Z6 253 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 UBTFL6P0CB48 400 aaPredicted RBP13.21□□□□□ -0.29
SNF8-212ENST00000514089 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 MTPNP58546 118 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 KCNJ10P78508 379 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 CDK6Q00534 326 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
SNF8-212ENST00000514089 SF3B4Q15427 424 aaKnown RBP eCLIP13.21□□□□□ -0.298e-9■■■■□ 21.6
SNF8-212ENST00000514089 ZNF141Q15928 474 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 C3AR1Q16581 482 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 FJX1Q86VR8 437 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 MSRB3Q8IXL7 192 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 METTL25Q8N6Q8 603 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 FADS6Q8N9I5 356 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 CCDC197Q8NCU1 140 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 RNF138Q8WVD3 245 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 OIT3Q8WWZ8 545 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 RCN3Q96D15 328 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 TMEM19Q96HH6 336 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 PIGQQ9BRB3 760 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 CCDC106Q9BWC9 280 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 A4GALTQ9NPC4 353 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 CAMK2AQ9UQM7 478 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 VDAC3Q9Y277 283 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 SLC35A3Q9Y2D2 325 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 MRPS18CQ9Y3D5 142 aaKnown RBP13.21□□□□□ -0.29
SNF8-212ENST00000514089 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.29
SNF8-212ENST00000514089 PRAMEF27A3QJZ7 478 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 C17orf51A8MQB3 221 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 NDUFAB1O14561 156 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 EIF4E2O60573 245 aaKnown RBP13.2□□□□□ -0.3
SNF8-212ENST00000514089 TNFRSF21O75509 655 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 STSP08842 583 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 GPX2P18283 190 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 P2RX1P51575 399 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 MVDP53602 400 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 SRYQ05066 204 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 CBFBQ13951 182 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 SCARB2Q14108 478 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 CD226Q15762 336 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 C4orf17Q53FE4 359 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 MTFR2Q6P444 385 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 PM20D2Q8IYS1 436 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 NFKBIDQ8NI38 313 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 ZNF563Q8TA94 476 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 BBS10Q8TAM1 723 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 NTNG2Q96CW9 530 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 ZG16BQ96DA0 208 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 TIMP4Q99727 224 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 TREX2Q9BQ50 279 aaPredicted RBP13.2□□□□□ -0.3
SNF8-212ENST00000514089 CPPED1Q9BRF8 314 aaPredicted RBP13.2□□□□□ -0.3
SNF8-212ENST00000514089 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 OR2B2Q9GZK3 357 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 SAP130Q9H0E3 1048 aa13.2□□□□□ -0.3
SNF8-212ENST00000514089 QRSL1Q9H0R6 528 aaKnown RBP13.2□□□□□ -0.3
SNF8-212ENST00000514089 SLC38A1Q9H2H9 487 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms