RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MED17Q9NVC6 651 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 CPSF2Q9P2I0 782 aaKnown RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 TMEFF2Q9UIK5 374 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-227ENST00000513452 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 PCNX3Q9H6A9 2034 aa9.25□□□□□ -0.93
CLDND1-227ENST00000513452 IGHV3-15A0A0B4J1V0 119 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 C7orf72A4D263 438 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 LRP5LA4QPB2 252 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 OR5H1A6NKK0 313 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 SMAD9O15198 467 aaKnown RBP9.24□□□□□ -0.93
CLDND1-227ENST00000513452 RGS9O75916 674 aaPredicted RBP9.24□□□□□ -0.93
CLDND1-227ENST00000513452 PRKD3O94806 890 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 IL33O95760 270 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 IL3P08700 152 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 IGHV1-2P23083 117 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 EDNRAP25101 427 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 PTAFRP25105 342 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 CD40P25942 277 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 OR3A2P47893 321 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 PRR5P85299 388 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 CHRNEQ04844 493 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 CPTPQ5TA50 214 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 FCRLAQ7L513 359 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 CDYL2Q8N8U2 506 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 SORCS2Q96PQ0 1159 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 BPESC1Q9GZL8 116 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 GP6Q9HCN6 339 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 TIGARQ9NQ88 270 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 MRTO4Q9UKD2 239 aaKnown RBP9.24□□□□□ -0.93
CLDND1-227ENST00000513452 TNPO3Q9Y5L0 923 aaKnown RBP9.24□□□□□ -0.93
CLDND1-227ENST00000513452 ATP23Q9Y6H3 246 aa9.24□□□□□ -0.93
CLDND1-227ENST00000513452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLDND1-227ENST00000513452 A0A0A6YYJ9 748 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 A0A0G2JK05 382 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 A0A1W2PR80 420 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 E7ESA3 106 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SLCO1B7G3V0H7 640 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 M0R1B8 84 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 RAD51DO75771 328 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 COX5AP20674 150 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 CRABP2P29373 138 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SSTR1P30872 391 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SPRP35270 261 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 PSMD4P55036 377 aaKnown RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 TRA2BP62995 288 aaKnown RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SLC18A2Q05940 514 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 TRAF3Q13114 568 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 ZNHIT3Q15649 155 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 TCHHL1Q5QJ38 904 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 PRR31Q5SQ13 230 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 FAM219BQ5XKK7 198 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 TMEM107Q6UX40 140 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF662Q6ZS27 426 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 TRABD2AQ86V40 505 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 P2RY8Q86VZ1 359 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SAMD14Q8IZD0 417 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 CENPLQ8N0S6 344 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 RHEBL1Q8TAI7 183 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 POC1BQ8TC44 478 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 SH3YL1Q96HL8 342 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 KLHDC3Q9BQ90 382 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 INPP5KQ9BT40 448 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 METTL17Q9H7H0 456 aaPredicted RBP9.23□□□□□ -0.93
CLDND1-227ENST00000513452 CXorf36Q9H7Y0 433 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 MYNNQ9NPC7 610 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
CLDND1-227ENST00000513452 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 TCRBV9S1A1TA0A576 114 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 GXYLT2A0PJZ3 443 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 TMEM89A2RUT3 159 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 C9JVG2 144 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 SEC31AO94979 1220 aaKnown RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 PGM3O95394 542 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 PDYNP01213 254 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 IGKV1D-16P01601 117 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ENPP1P22413 925 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 IL2RGP31785 369 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 MPIP34949 423 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 MANFP55145 182 aaKnown RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 FOXF1Q12946 379 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 CTAGE3PQ8IX95 158 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF433Q8N7K0 673 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 PTGR2Q8N8N7 351 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ANKS4BQ8N8V4 417 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 FAM110BQ8TC76 370 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ACTRT1Q8TDG2 376 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ACTRT2Q8TDY3 377 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 SELENOMQ8WWX9 145 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 ZNF775Q96BV0 537 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 FBXO17Q96EF6 278 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 NSUN5Q96P11 429 aaKnown RBP9.22□□□□□ -0.93
CLDND1-227ENST00000513452 BBS4Q96RK4 519 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 TRIM31Q9BZY9 425 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 BCO1Q9HAY6 547 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 SLC35C2Q9NQQ7 365 aa9.22□□□□□ -0.93
CLDND1-227ENST00000513452 DDX18Q9NVP1 670 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms