RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZFP28Q8NHY6 868 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 AENQ8WTP8 325 aaKnown RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ZBED6CLQ96FA7 236 aaPredicted RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 PERPQ96FX8 193 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 APOPT1Q96IL0 206 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 TRMOQ9BU70 441 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 RTN4RQ9BZR6 473 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 LRTM1Q9HBL6 345 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 UBQLN4Q9NRR5 601 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 C1orf109Q9NX04 203 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 SLC17A7Q9P2U7 560 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 LGALS13Q9UHV8 139 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 DNAJC15Q9Y5T4 150 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 A0A1W2PQD3 144 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 TMEM233B4DJY2 109 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 EIF1AYO14602 144 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 HS3ST1O14792 307 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 THBDP07204 575 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 CHRNGP07510 517 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 FGF4P08620 206 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 LINC00032P0C843 101 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 CREB1P16220 341 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 EIF1AXP47813 144 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 SERPINB4P48594 390 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 CARD18P57730 90 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 STX5Q13190 355 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 RFTN2Q52LD8 501 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF385BQ569K4 471 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ANKRD26P1Q6NSI1 321 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 APOOLQ6UXV4 268 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 C22orf34Q6ZV56 151 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF551Q7Z340 670 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 GPR151Q8TDV0 419 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 TRMT61AQ96FX7 289 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ZC3HAV1LQ96H79 300 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 TACO1Q9BSH4 297 aaKnown RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 MECRQ9BV79 373 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 ACSS1Q9NUB1 689 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-216ENST00000512683 GIN1Q9NXP7 522 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
VEGFA-216ENST00000512683 GJE1A6NN92 205 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 LSM1O15116 133 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 RGS14O43566 566 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 NPHS1O60500 1241 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 SPAG7O75391 227 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 TUBBP07437 444 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 HPGDP15428 266 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 SDC1P18827 310 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 PSMA4P25789 261 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 ARRB2P32121 409 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 FRKP42685 505 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 EXOC3L2Q2M3D2 409 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 CTU2Q2VPK5 515 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 GRAMD1BQ3KR37 738 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 ARL13AQ5H913 290 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 ANKRD34AQ69YU3 496 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 NATD1Q8N6N6 113 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 OR4C3Q8NH37 302 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 HSD17B8Q92506 261 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 OSTF1Q92882 214 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 GTPBP3Q969Y2 492 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 CIDECQ96AQ7 238 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 MTERF3Q96E29 417 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 REXO5Q96IC2 774 aaKnown RBP11.24□□□□□ -0.61
VEGFA-216ENST00000512683 CCT7Q99832 543 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 ACTR6Q9GZN1 396 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 HOXD1Q9GZZ0 328 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 FLRT3Q9NZU0 649 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 TMED5Q9Y3A6 229 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 TLN2Q9Y4G6 2542 aa11.24□□□□□ -0.61
VEGFA-216ENST00000512683 A0A1W2PRB8 838 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 TRIM64A6NGJ6 449 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 TRIM64BA6NI03 449 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 SCDO00767 359 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 PDPK1O15530 556 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 AKAP10O43572 662 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 NEFHP12036 1026 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ELK4P28324 431 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 PCSK6P29122 969 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 GPC1P35052 558 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 IDUAP35475 653 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 SLC6A8P48029 635 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 PRIM2P49643 509 aa11.23□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF41P51814 821 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-216ENST00000512683 MANFP55145 182 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms