RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ALDH18A1P54886 795 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 DSCR4P56555 118 aaPredicted RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 MGAT2Q10469 447 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 CARTPTQ16568 116 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 SGCBQ16585 318 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ZSWIM7Q19AV6 140 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 IQCCQ4KMZ1 466 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ZNF678Q5SXM1 525 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 MRM1Q6IN84 353 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 FAM111BQ6SJ93 734 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 TFAP2EQ6VUC0 442 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 Q6ZSR9 355 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 NUFIP2Q7Z417 695 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 STK32CQ86UX6 486 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 C10orf107Q8IVU9 208 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 FBXL14Q8N1E6 418 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 CCDC63Q8NA47 563 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 SRFBP1Q8NEF9 429 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 OR2M3Q8NG83 312 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 OR4K17Q8NGC6 315 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 OR6Y1Q8NGX8 325 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 MGARPQ8TDB4 240 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 UBTD2Q8WUN7 234 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 TMBIM1Q969X1 311 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 WDR34Q96EX3 536 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 NSUN5Q96P11 429 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 TMEM237Q96Q45 408 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 HDHD5Q9BXW7 423 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 ZNF717Q9BY31 904 aaPredicted RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 POTEKPQ9BYX7 375 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 CD244Q9BZW8 370 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 BPESC1Q9GZL8 116 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 IQCGQ9H095 443 aaKnown RBP8.05□□□□□ -1.12
NUP54-211ENST00000512151 EHD1Q9H4M9 534 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 FANCFQ9NPI8 374 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 OXSMQ9NWU1 459 aa8.05□□□□□ -1.12
NUP54-211ENST00000512151 GOLGA8QA0A0J9YX86 632 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 GOLGA8OA6NCC3 632 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 GOLGA8NF8WBI6 632 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PPP6CO00743 305 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PLPP1O14494 284 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 CCNT2O60583 730 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 SMIM24O75264 130 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 NME6O75414 186 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 OPN1LWP04000 364 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 S100BP04271 92 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 RPS17P08708 135 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 NR2F6P10588 404 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 MYL2P10916 166 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 CHN1P15882 459 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 EPB42P16452 691 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 TSPAN8P19075 237 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 TAC1P20366 129 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 IMPDH1P20839 514 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 ZFP36P26651 326 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 TLX1P31314 330 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 ARRB2P32121 409 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 CASP2P42575 452 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 EIF1AXP47813 144 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 SERPINB4P48594 390 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 HNMTP50135 292 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 FABP6P51161 128 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PRKAA2P54646 552 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 RPS3AP61247 264 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 GUCY1A3Q02108 690 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 TMEM35AQ53FP2 167 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 KHDRBS2Q5VWX1 349 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 BHLHA15Q7RTS1 189 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 GALNT10Q86SR1 603 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 TCAIMQ8N3R3 496 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 LINC01356Q8N9X3 169 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 ADCY4Q8NFM4 1077 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 BCAS4Q8TDM0 211 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 ZNF483Q8TF39 744 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 ZNF418Q8TF45 676 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 KISS1RQ969F8 398 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 GFM2Q969S9 779 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 L3HYPDHQ96EM0 354 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PTCD3Q96EY7 689 aaKnown RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 ADGRG7Q96K78 797 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 COL21A1Q96P44 957 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 SORCS2Q96PQ0 1159 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
NUP54-211ENST00000512151 C1QTNF3Q9BXJ4 246 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PRRG4Q9BZD6 226 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 RTN4RQ9BZR6 473 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 C20orf27Q9GZN8 174 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 GSTO2Q9H4Y5 243 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 ZBTB26Q9HCK0 441 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 ESM1Q9NQ30 184 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 MS4A12Q9NXJ0 267 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 MED11Q9P086 117 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PHF11Q9UIL8 331 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 PCTPQ9UKL6 214 aa8.04□□□□□ -1.12
NUP54-211ENST00000512151 OR6C70A6NIJ9 312 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 ZNF814B7Z6K7 855 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 K7EPI3 171 aa8.03□□□□□ -1.12
NUP54-211ENST00000512151 NDUFS8O00217 210 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms