RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PIK3R3Q92569 461 aa16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 APIPQ96GX9 242 aa16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 KLHL15Q96M94 604 aa16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 LMF2Q9BU23 707 aaKnown RBP16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 PRR14Q9BWN1 585 aa16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 STOML1Q9UBI4 398 aa16.8■□□□□ 0.28
HMGCS1-206ENST00000511774 A0A087WZY1 265 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 MANBAO00462 879 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 OR4F21O95013 312 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 CFPP27918 469 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 CLK3P49761 638 aaKnown RBP16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 RAB35Q15286 201 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 Q6ZSR9 355 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 TDRPQ86YL5 185 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 OR2L13Q8N349 312 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 EBPLQ9BY08 206 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 ACPTQ9BZG2 426 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 CXorf36Q9H7Y0 433 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 Q9N2J8 555 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 KCNS2Q9ULS6 477 aa16.79■□□□□ 0.28
HMGCS1-206ENST00000511774 LOC100289279A0A1B0GTE1 492 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 VWC2LB2RUY7 222 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 ALG1L2C9J202 215 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 OXSR1O95747 527 aaPredicted RBP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 TCP1P17987 556 aaKnown RBP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 GABRA3P34903 492 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 MPIP34949 423 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 HTR6P50406 440 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 NCBP2P52298 156 aaKnown RBP eCLIP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 MANFP55145 182 aaKnown RBP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 GTF2IRD2BQ6EKJ0 949 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 FAM166AQ6J272 317 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 Q6ZT83 130 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 CCDC91Q7Z6B0 441 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 GTF2IRD2Q86UP8 949 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 SAMD14Q8IZD0 417 aaPredicted RBP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 PROX1Q92786 737 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 ZBTB8AQ96BR9 441 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 SH3YL1Q96HL8 342 aaPredicted RBP16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 DHRS9Q9BPW9 319 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 SOX7Q9BT81 388 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 VPS11Q9H270 941 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 COQ10BQ9H8M1 238 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 GIMAP4Q9NUV9 329 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
HMGCS1-206ENST00000511774 IGHV3-15A0A0B4J1V0 119 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 GNG14A0A1W2PPG7 69 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 C9JVG2 144 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 H7C417 338 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 NDUFB5O43674 189 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 DLX3O60479 287 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 YES1P07947 543 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 SBK3P0C264 359 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 LINGO3P0C6S8 592 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 ENPP1P22413 925 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 IGHV1-2P23083 117 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 GZMKP49863 264 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 RNPS1Q15287 305 aaKnown RBP16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 KLC3Q6P597 504 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 FCRLAQ7L513 359 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 TRABD2AQ86V40 505 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 MEX3DQ86XN8 651 aaKnown RBP16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 PIAS4Q8N2W9 510 aaPredicted RBP16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 MUC15Q8N387 334 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 CDYL2Q8N8U2 506 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 OR2W6PQ8NHA6 318 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 ZNF775Q96BV0 537 aaPredicted RBP16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 ZNF524Q96C55 264 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 ADAM19Q9H013 955 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 GLIPR2Q9H4G4 154 aa16.77■□□□□ 0.28
HMGCS1-206ENST00000511774 OTCP00480 354 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 MAP3K8P41279 467 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 MAGEA4P43358 317 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 OR3A2P47893 321 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 PRIM2P49643 509 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 FOXF1Q12946 379 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 NAB1Q13506 487 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 GGTLC2Q14390 218 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 TRADDQ15628 312 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 CD226Q15762 336 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 ELP4Q96EB1 424 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 DDX18Q9NVP1 670 aaKnown RBP16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 NMRK1Q9NWW6 199 aa16.76■□□□□ 0.27
HMGCS1-206ENST00000511774 IGHV4-61A0A0C4DH41 118 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 OIP5O43482 229 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 PGM3O95394 542 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 ITGA2P17301 1181 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 COX5AP20674 150 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 DDCP20711 480 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 ME2P23368 584 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 TYK2P29597 1187 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 TIA1P31483 386 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 STX2P32856 288 aa16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 ZNF41P51814 821 aaPredicted RBP16.75■□□□□ 0.27
HMGCS1-206ENST00000511774 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms