RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR51I1Q9H343 314 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PIGUQ9H490 435 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CCDC134Q9H6E4 229 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 METTL7AQ9H8H3 244 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TCF7L2Q9NQB0 619 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 FGFR1OP2Q9NVK5 253 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM120CQ9NX05 1096 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 GIN1Q9NXP7 522 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TAS2R9Q9NYW1 312 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 ZIM2Q9NZV7 527 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CNIH4Q9P003 139 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 BTNL2Q9UIR0 455 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CFL2Q9Y281 166 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 SNX8Q9Y5X2 465 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 CACNA1CQ13936 2221 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 PCNX1Q96RV3 2341 aa6.54□□□□□ -1.36
TOPBP1-207ENST00000509162 TRGV8A0A0C4DH27 118 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC22A31A6NKX4 558 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CLDN24A6NM45 220 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 TRPC5OSA6NMA1 111 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SLCO1B7G3V0H7 640 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 FXYD1O00168 92 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 HMGN4O00479 90 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 KIAA0513O60268 411 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 ZIC3O60481 467 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 FCMRO60667 390 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 REM1O75628 298 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 BCAS2O75934 225 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 TOXO94900 526 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CPSF4O95639 269 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 PGRP06401 933 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 NGFRP08138 427 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 NID1P14543 1247 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 IL11P20809 199 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 PSMA4P25789 261 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 GDF1P27539 372 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SHC1P29353 583 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 RPL3P39023 403 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 DCTP40126 519 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 GATA4P43694 442 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CCT3P49368 545 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 PRIM2P49643 509 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 TMED10P49755 219 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 PNLIPRP2P54317 469 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 GFRA1P56159 465 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 NRG3P56975 720 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF117Q03924 483 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SELPLGQ14242 412 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CYP27C1Q4G0S4 372 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 DCST2Q5T1A1 773 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 NXNQ6DKJ4 435 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 POMZP3Q6PJE2 187 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CBLN3Q6UW01 205 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 ARSKQ6UWY0 536 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 FRRS1Q6ZNA5 592 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 C6orf120Q7Z4R8 191 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 COX18Q8N8Q8 333 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM98AQ8NCA5 519 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CHDHQ8NE62 594 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 OR56A1Q8NGH5 318 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 MIPOL1Q8TD10 442 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 ZFP90Q8TF47 636 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SSC4DQ8WTU2 575 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 C10orf82Q8WW14 230 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 GTF2H4Q92759 462 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 NEURL3Q96EH8 262 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 PLPPR2Q96GM1 343 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 STACQ99469 402 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CPPED1Q9BRF8 314 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM120AQ9BXJ8 343 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 ACTRT3Q9BYD9 372 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 Q9N2J8 555 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 DUSP22Q9NRW4 184 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 KLRF1Q9NZS2 232 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 REV1Q9UBZ9 1251 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 BOKQ9UMX3 212 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC5A6Q9Y289 635 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 MEMO1Q9Y316 297 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 OR10H1Q9Y4A9 318 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CHST2Q9Y4C5 530 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 CORINQ9Y5Q5 1042 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 MAST4O15021 2626 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 GTF3C1Q12789 2109 aa6.53□□□□□ -1.36
TOPBP1-207ENST00000509162 DSPPQ9NZW4 1301 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PHF3Q92576 2039 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 TRGV5A0A0B4J1U4 118 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 PRSS51A0A1B0GVH4 220 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 FAM234BA2RU67 622 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 ALG1L2C9J202 215 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NPIPA2E9PIF3 369 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NPIPA3F8WFD2 350 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 NR5A2O00482 541 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 FBP2O00757 339 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 UBDO15205 165 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 GMFGO60234 142 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 UGT2B17O75795 530 aa6.52□□□□□ -1.37
TOPBP1-207ENST00000509162 AGFG2O95081 481 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms