RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 ZNF527Q8NB42 609 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 FNDC8Q8TC99 324 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 TMEM255BQ8WV15 326 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 DNAJA4Q8WW22 397 aaPredicted RBP8.56□□□□□ -1.04
HTT-205ENST00000509043 PPP1R14BQ96C90 147 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 SH3YL1Q96HL8 342 aaPredicted RBP8.56□□□□□ -1.04
HTT-205ENST00000509043 SLC46A1Q96NT5 459 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
HTT-205ENST00000509043 GPA33Q99795 319 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 DPYSL5Q9BPU6 564 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 PRSS27Q9BQR3 290 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 ZNF426Q9BUY5 554 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 TAPBPLQ9BX59 468 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 SLC19A3Q9BZV2 496 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 OR10A5Q9H207 317 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 DCSTAMPQ9H295 470 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 SIDT1Q9NXL6 827 aaKnown RBP8.56□□□□□ -1.04
HTT-205ENST00000509043 DNAJC27Q9NZQ0 273 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 SELENONQ9NZV5 590 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 CNIH4Q9P003 139 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 SERTAD3Q9UJW9 196 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 ZNF223Q9UK11 482 aaPredicted RBP8.56□□□□□ -1.04
HTT-205ENST00000509043 CBLCQ9ULV8 474 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 REV3LO60673 3130 aa8.56□□□□□ -1.04
HTT-205ENST00000509043 CCDC88CQ9P219 2028 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 GXYLT2A0PJZ3 443 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 C19orf67A6NJJ6 358 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 H3BMH7 237 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 TAF4O00268 1085 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 STK25O00506 426 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 PEX12O00623 359 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 DSCR3O14972 297 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 SURF4O15260 269 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 PPM1BO75688 479 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 LYPD3O95274 346 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 THY1P04216 161 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 IFNA16P05015 189 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 IGFBP1P08833 259 aaPredicted RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 GADD45AP24522 165 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 HTR2AP28223 471 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 HTR1FP30939 366 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 PPICP45877 212 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 GPR143P51810 404 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 GFERP55789 205 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 NCS1P62166 190 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 FOXD4Q12950 439 aaPredicted RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 ELAVL1Q15717 326 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 CLPPQ16740 277 aaPredicted RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 SYT16Q17RD7 645 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 ZNF404Q494X3 552 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 AADACL4Q5VUY2 407 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 C16orf87Q6PH81 154 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 ULK3Q6PHR2 472 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 FIGNL1Q6PIW4 674 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 ARHGAP22Q7Z5H3 698 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 HMGN2P46Q86SG4 172 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 LNX2Q8N448 690 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 IQCF1Q8N6M8 205 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 ZNF615Q8N8J6 731 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 MINDY2Q8NBR6 621 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 GALNT6Q8NCL4 622 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 PSD4Q8NDX1 1056 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 SIMC1Q8NDZ2 872 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 OR52I1Q8NGK6 324 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 OR8D4Q8NGM9 314 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 OR6Q1Q8NGQ2 317 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 NDNFQ8TB73 568 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 ELF4Q99607 663 aaPredicted RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 COQ7Q99807 217 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 NDC1Q9BTX1 674 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 PLA2G12AQ9BZM1 189 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 SLIRPQ9GZT3 109 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 NXF2Q9GZY0 626 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 ZNF768Q9H5H4 540 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 EGLN3Q9H6Z9 239 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 AKIP1Q9NQ31 210 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 EXOSC3Q9NQT5 275 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 CTPS2Q9NRF8 586 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 INPP5EQ9NRR6 644 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 TBCCD1Q9NVR7 557 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 NDUFB11Q9NX14 153 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 H2AFY2Q9P0M6 372 aaPredicted RBP8.55□□□□□ -1.04
HTT-205ENST00000509043 KCNE5Q9UJ90 142 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 SRPK3Q9UPE1 567 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 OR10H1Q9Y4A9 318 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 CLDN16Q9Y5I7 305 aa8.55□□□□□ -1.04
HTT-205ENST00000509043 IGKV3D-11A0A0A0MRZ8 115 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 PNMA8CA0A1B0GUJ8 204 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 SERINC4A6NH21 518 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 SAGE2PA6NJ88 616 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 OR6C76A6NM76 312 aa8.54□□□□□ -1.04
HTT-205ENST00000509043 TMX2-CTNND1H3BSU7 103 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms