RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CD8BP10966 210 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 CYP3A5P20815 502 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ID1P41134 155 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 CORO7P57737 925 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PTENP60484 403 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 RAE1P78406 368 aaKnown RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LAMTOR4Q0VGL1 99 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TOP3AQ13472 1001 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF266Q14584 549 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ECSCRQ19T08 205 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LBHQ53QV2 105 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 C1orf220Q5T0J3 134 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TEX38Q6PEX7 206 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 H2AFVQ71UI9 128 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 D2HGDHQ8N465 521 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 STOML3Q8TAV4 291 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SFXN5Q8TD22 340 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ACTRT1Q8TDG2 376 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SMPDL3AQ92484 453 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LRR1Q96L50 414 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM209Q96SK2 561 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PRDM13Q9H4Q3 707 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 GNG12Q9UBI6 72 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 EPHA6Q9UF33 1036 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 DCDC2Q9UHG0 476 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SLCO3A1Q9UIG8 710 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FBXL2Q9UKC9 423 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF490Q9ULM2 529 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 GOLT1BQ9Y3E0 138 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SAR1BQ9Y6B6 198 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TCRBV5S2A0A599 114 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 UBE2QL1A1L167 161 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 C15orf62A8K5M9 175 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 MIF4GDA9UHW6 222 aaKnown RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FOXE1O00358 373 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SPRY1O43609 319 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LEFTY1O75610 366 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TSPAN15O95858 294 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 NPSP0C0P6 89 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 DPP4P27487 766 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SEC61A1P61619 476 aaKnown RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FADDQ13158 208 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 RNPS1Q15287 305 aaKnown RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 STILQ15468 1287 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LYRM7Q5U5X0 104 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 UQCC3Q6UW78 93 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 AHSA2Q719I0 299 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM151BQ8IW70 566 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SLC35F6Q8N357 371 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 FAM71CQ8NEG0 241 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 OR13G1Q8NGZ3 307 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 LRRC29Q8WV35 223 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ZSWIM1Q9BR11 485 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF251Q9BRH9 671 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PDCD10Q9BUL8 212 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ELOVL1Q9BW60 279 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 MRPL18Q9H0U6 180 aaKnown RBP3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PPA2Q9H2U2 334 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 SLITRK6Q9H5Y7 841 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 OPTCQ9UBM4 332 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 DKKL1Q9UK85 242 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 NRCAMQ92823 1304 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 PLXNA3P51805 1871 aa3.65□□□□□ -1.82
NEDD4-209ENST00000508871 ARGFXA6NJG6 315 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ANKRD63C9JTQ0 380 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 F8WDY8 70 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MAP2K7O14733 419 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 FAM189A1O60320 539 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ADAP00813 363 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CPN1P15169 458 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ELNP15502 786 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 CDH5P33151 784 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 INPP1P49441 399 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 SUOXP51687 545 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF134P52741 427 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 GPC5P78333 572 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 LCN2P80188 198 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RAD51Q06609 339 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PDIA2Q13087 525 aaKnown RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 AANATQ16613 207 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF691Q5VV52 312 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 NKAIN2Q5VXU1 208 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 OR5M10Q6IEU7 315 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 BHLHB9Q6PI77 547 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF730Q6ZMV8 503 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 WDR53Q7Z5U6 358 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 S100A7AQ86SG5 101 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF761Q86XN6 746 aaPredicted RBP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 PLXDC1Q8IUK5 500 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF683Q8IZ20 524 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 DHRSXQ8N5I4 330 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 MRAPQ8TCY5 172 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 RAB1CQ92928 201 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 LHX4Q969G2 390 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.65□□□□□ -1.83
NEDD4-209ENST00000508871 FAM136AQ96C01 138 aa3.65□□□□□ -1.83
NEDD4-209ENST00000508871 ATG101Q9BSB4 218 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms