RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 OR51V1Q9H2C8 321 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MRPS30Q9NP92 439 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ABCC13Q9NSE7 274 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CD84Q9UIB8 345 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MAFFQ9ULX9 164 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CA5BQ9Y2D0 317 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 WDR81Q562E7 1941 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 RTTNQ86VV8 2226 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 C1orf196B1AJZ1 125 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 WASH3PC4AMC7 463 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CASC3O15234 703 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 IRAK2O43187 625 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 SULT1B1O43704 296 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 IGHV2-70P01814 119 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 PMP2P02689 132 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 HLA-DPB1P04440 258 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CLUP10909 449 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 EDN3P14138 238 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 HOXB9P17482 250 aaPredicted RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ATF1P18846 271 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 GABRA5P31644 462 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 GPR4P46093 362 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ANXA11P50995 505 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CCR8P51685 355 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CDH11P55287 796 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 WDR5P61964 334 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CACNG1Q06432 222 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 IRF4Q15306 451 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CCSMST1Q4G0I0 132 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TMEM201Q5SNT2 666 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 OAFQ86UD1 273 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TMEM200AQ86VY9 491 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MCATQ8IVS2 390 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TTC9BQ8N6N2 239 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 WDSUB1Q8N9V3 476 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF383Q8NA42 475 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 IL17RCQ8NAC3 791 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MTMR14Q8NCE2 650 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 OR52E4Q8NGH9 312 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 DUSP19Q8WTR2 217 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TNFAIP8L1Q8WVP5 186 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 DNAJB3Q8WWF6 145 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ECHDC3Q96DC8 303 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 HRH4Q9H3N8 390 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 IL21RQ9HBE5 538 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 RDH14Q9HBH5 336 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 FAM212BQ9NTI7 297 aaPredicted RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 NUDT4Q9NZJ9 180 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 FBXO4Q9UKT5 387 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ENPP4Q9Y6X5 453 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MYO9BQ13459 2157 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 DENND4AQ7Z401 1863 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 RTCAO00442 366 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 VEGFDO43915 354 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 B3GAT3O94766 335 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ACTL6AO96019 429 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ARG1P05089 322 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 TMIGD3P0DMS9 266 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 VSIG10L2P0DP72 767 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF44P15621 663 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF14P17017 642 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 CD22P20273 847 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 WARSP23381 471 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 RPL3P39023 403 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 PCP4P48539 62 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF140P52738 457 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF155Q12901 538 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ZBTB6Q15916 424 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 DCAF4L1Q3SXM0 396 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 OTPQ5XKR4 325 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 TRIM46Q7Z4K8 759 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ARL14Q8N4G2 192 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ADAMTS19Q8TE59 1207 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 XAGE5Q8WWM1 108 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 PDXPQ96GD0 296 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 MARS2Q96GW9 593 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 JSRP1Q96MG2 331 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 F2RL3Q96RI0 385 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 CINPQ9BW66 212 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 POLDIP3Q9BY77 421 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 HRASLSQ9HDD0 168 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 HACL1Q9UJ83 578 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 FBXL4Q9UKA2 621 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 GJA3Q9Y6H8 435 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 GREB1LQ9C091 1923 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 ABCA3Q99758 1704 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 A6NLC8 198 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 HHLA1C9JL84 531 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 E9PQ18 207 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 H7C1Q1 480 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 K7ERQ8 282 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 INSIG1O15503 277 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 HBP1O60381 514 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 VNN2O95498 520 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 SERPIND1P05546 499 aa6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 PSMB1P20618 241 aaKnown RBP6.78□□□□□ -1.32
LIMCH1-207ENST00000508466 LPOP22079 712 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms