RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SLC35C2Q9NQQ7 365 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 STARD7Q9NQZ5 370 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 MAN2C1Q9NTJ4 1040 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZCCHC3Q9NUD5 404 aaKnown RBP4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 MED9Q9NWA0 146 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 IL20Q9NYY1 176 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF224Q9NZL3 707 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 MAT2BQ9NZL9 334 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 IL36AQ9UHA7 158 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 MBD1Q9UIS9 605 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 FBXL21Q9UKT6 434 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZFR2Q9UPR6 939 aaKnown RBP4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 CAMK2AQ9UQM7 478 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM5Q9Y2B1 443 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR52Q9Y2T5 361 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 YARS2Q9Y2Z4 477 aaKnown RBP4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 ALPK3Q96L96 1907 aa4.64□□□□□ -1.67
HMGB3P16-201ENST00000508037 KIAA1671Q9BY89 1806 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 C2orf92A0A1B0GVN3 265 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A1W2PRG6 482 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 UNC119BA6NIH7 251 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RIIAD1A6NNX1 92 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF879B4DU55 563 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRR23D1E9PI22 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR171O14626 319 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FLRT2O43155 660 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF749O43361 778 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLPP2O43688 288 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SULT1B1O43704 296 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SEMA7AO75326 666 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PEX14O75381 377 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 LEFTY1O75610 366 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 POP7O75817 140 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GATBO75879 557 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 WDPCPO95876 746 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRNPP04156 253 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CD1AP06126 327 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 EIF4EP06730 217 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GIPP09681 153 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRR23D2P0DMB1 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERGP11308 486 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 NID1P14543 1247 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GNSP15586 552 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TYRP1P17643 537 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 BMP7P18075 431 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CSNK2A2P19784 350 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAB3BP20337 219 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZP3P21754 424 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACADLP28330 430 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PDHA2P29803 388 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 MPIP34949 423 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TRIM23P36406 574 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SSR2P43308 183 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TSFMP43897 325 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR1P46091 355 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OMPP47874 163 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GBX2P52951 348 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CAV3P56539 151 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RGS8P57771 180 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAP2BP61225 183 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ST8SIA6P61647 398 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACTA2P62736 377 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAC1P63000 192 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACTG2P63267 376 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 DHODHQ02127 395 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPL6Q02878 288 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLAURQ03405 335 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF155Q12901 538 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SNTB2Q13425 540 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 EXOSC2Q13868 293 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CAMK1Q14012 370 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FGFBP1Q14512 234 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC9A5Q14940 896 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 MFSD13AQ14CX5 517 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SYPL1Q16563 259 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GSG1Q2KHT4 349 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRSS53Q2L4Q9 553 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF791Q3KP31 576 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 UBE2NLQ5JXB2 153 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 EOGTQ5NDL2 527 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELFN2Q5R3F8 820 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SPOUT1Q5T280 376 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR4C11Q6IEV9 310 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM198BQ6UWH4 519 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 LIPIQ6XZB0 460 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF620Q6ZNG0 422 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OVCH1Q7RTY7 1134 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 WDR53Q7Z5U6 358 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CEACAM19Q7Z692 300 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMCO2Q7Z6W1 182 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GLCCI1Q86VQ1 547 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM173Q86WV6 379 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RBM45Q8IUH3 476 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TIGD4Q8IY51 512 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CMTM8Q8IZV2 173 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR6V1Q8N148 313 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 HDDC3Q8N4P3 179 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SPICQ8N5J4 248 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF366Q8N895 744 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms