RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 CALML5Q9NZT1 146 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 HCN3Q9P1Z3 774 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 C19orf53Q9UNZ5 99 aaPredicted RBP13.47□□□□□ -0.25
DDX41-208ENST00000507955 N6AMT1Q9Y5N5 214 aa13.47□□□□□ -0.25
DDX41-208ENST00000507955 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 SPTY2D1-AS1A0A0U1RR47 76 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 URADA6NGE7 173 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 ZNF670-ZNF695F2Z2N8 137 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 SOCS6O14544 535 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 GALR3O60755 368 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 ADAM11O75078 769 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 APOA1P02647 267 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 MTNR1AP48039 350 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 NDUFA9Q16795 377 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 GRHL3Q8TE85 626 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 SMAP2Q8WU79 429 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 PRSS27Q9BQR3 290 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 ZNF576Q9H609 170 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 NDUFB11Q9NX14 153 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 NTMQ9P121 344 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 DIMT1Q9UNQ2 313 aaKnown RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 A0A0J9YY10 115 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 PRAMEF26H0Y7S4 382 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 GPR75O95800 540 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 MAKP20794 623 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 GSTM3P21266 225 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 RPS25P62851 125 aaKnown RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 PSPHP78330 225 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 MGAT2Q10469 447 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 DUSP8Q13202 625 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 TAB1Q15750 504 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 RASSF6Q6ZTQ3 369 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 POGLUT1Q8NBL1 392 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 ANKRD9Q96BM1 317 aaPredicted RBP13.46□□□□□ -0.25
DDX41-208ENST00000507955 SRRQ9GZT4 340 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 PIGUQ9H490 435 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 DTX4Q9Y2E6 619 aa13.46□□□□□ -0.25
DDX41-208ENST00000507955 ABCA7Q8IZY2 2146 aa13.46□□□□□ -0.26
DDX41-208ENST00000507955 SEC16AO15027 2179 aa13.46□□□□□ -0.26
DDX41-208ENST00000507955 HYKKA2RU49 373 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 SLC9B1P1A6NJY1 282 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 TGFBR3LH3BV60 316 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 PRODHO43272 600 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 CDRT1O95170 752 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 ZGLP1P0C6A0 271 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 MSL3P1P0C860 447 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 LIMS3P0CW19 117 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 LIMS4P0CW20 117 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 RABIFP47224 123 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 FXYD6P3P58550 94 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
DDX41-208ENST00000507955 SLC36A4Q6YBV0 504 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 PTCHD1Q96NR3 888 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 GDF15Q99988 308 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 STUB1Q9UNE7 303 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 PCDH15Q96QU1 1955 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 A0A1W2PQ09 198 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 FAM47E-STBD1D6RA91 191 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 DVL2O14641 736 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 GNB5O14775 395 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 SURF4O15260 269 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 IL7P13232 177 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 CDH11P55287 796 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 DECR1Q16698 335 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 ZNF791Q3KP31 576 aaPredicted RBP13.45□□□□□ -0.26
DDX41-208ENST00000507955 TMPRSS11AQ6ZMR5 421 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 MBOAT2Q6ZWT7 520 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 NLGN4YQ8NFZ3 816 aaPredicted RBP13.45□□□□□ -0.26
DDX41-208ENST00000507955 OR52R1Q8NGF1 315 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 C1GALT1C1Q96EU7 318 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 ART5Q96L15 291 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 NELL2Q99435 816 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 TBX5Q99593 518 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 HCAR1Q9BXC0 346 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 GSDMCQ9BYG8 508 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 ZNF350Q9GZX5 532 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 TWSG1Q9GZX9 223 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 POT1Q9NUX5 634 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 TXNL4BQ9NX01 149 aaKnown RBP13.45□□□□□ -0.26
DDX41-208ENST00000507955 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
DDX41-208ENST00000507955 SEC14L4Q9UDX3 406 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 HS3ST3A1Q9Y663 406 aa13.45□□□□□ -0.26
DDX41-208ENST00000507955 OR5K3A6NET4 321 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 STX11O75558 287 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 RFPL3O75679 317 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ATP1B1P05026 303 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 MYL12AP19105 171 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 SSTR4P31391 388 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms