RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MARCH7Q9H992 704 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 BRF2Q9HAW0 419 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 EML4Q9HC35 981 aaKnown RBP7.39□□□□□ -1.23
SCN1A-207ENST00000507401 OXSMQ9NWU1 459 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ACTR3BQ9P1U1 418 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM181Q9P2C4 612 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 XPR1Q9UBH6 696 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 CD300AQ9UGN4 299 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF639Q9UID6 485 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 ENPP5Q9UJA9 477 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 EMCNQ9ULC0 261 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 MEMO1Q9Y316 297 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 GRIP1Q9Y3R0 1128 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 SNX5Q9Y5X3 404 aa7.39□□□□□ -1.23
SCN1A-207ENST00000507401 DHRS12A0PJE2 317 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 OR6C76A6NM76 312 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 PRSS44E7EML9 344 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TFECO14948 347 aaPredicted RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TMPRSS11DO60235 418 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 EEDO75530 441 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 GLSO94925 669 aaPredicted RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 OTCP00480 354 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 JUNP05412 331 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 RPS17P08708 135 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SBK3P0C264 359 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 CCDC159P0C7I6 412 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ENDOUP21128 410 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 RRM2P31350 389 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 PTGS2P35354 604 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 GATA4P43694 442 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 DNAJB13P59910 316 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 HERVK_113P63132 956 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ADORA2A-AS1P86434 159 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 MS4A2Q01362 244 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ID2Q02363 134 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF45Q02386 682 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TRAF3Q13114 568 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SELENBP1Q13228 472 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 NRF1Q16656 503 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF791Q3KP31 576 aaPredicted RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TIGD2Q4W5G0 525 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SLC22A10Q63ZE4 541 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM211Q6ICI0 200 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ZYG11AQ6WRX3 759 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 C16orf47Q6ZP98 133 aaPredicted RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 GK5Q6ZS86 529 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 FGD2Q7Z6J4 655 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SLC22A16Q86VW1 577 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 METTL4Q8N3J2 472 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF321PQ8N8H1 164 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ASCC1Q8N9N2 400 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 OR2M7Q8NG81 312 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 OR4F6Q8NGB9 312 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 OR4K14Q8NGD5 310 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SETD6Q8TBK2 473 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 FAM57AQ8TBR7 257 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SLC22A8Q8TCC7 542 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 LRTOMTQ8WZ04 291 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 MTFMTQ96DP5 389 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 APOL4Q9BPW4 351 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 DHRS9Q9BPW9 319 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 FAM173AQ9BQD7 235 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ERVK-6Q9BXR3 956 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 MMP27Q9H306 513 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 C12orf65Q9H3J6 166 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ELOVL6Q9H5J4 265 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ZDHHC11Q9H8X9 412 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 LIN28AQ9H9Z2 209 aaKnown RBP7.38□□□□□ -1.23
SCN1A-207ENST00000507401 IL1RL2Q9HB29 575 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SH2D2AQ9NP31 389 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 CCNB1IP1Q9NPC3 277 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SACM1LQ9NTJ5 587 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 DEPPQ9NTK1 212 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 PNPOQ9NVS9 261 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 ADA2Q9NZK5 511 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 FRRS1LQ9P0K9 344 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 TINAGQ9UJW2 476 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 SNX6Q9UNH7 406 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 AP3M1Q9Y2T2 418 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 NDUFAF1Q9Y375 327 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 HSPE1-MOB4S4R3N1 261 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 PCNX1Q96RV3 2341 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 LRBAP50851 2863 aa7.38□□□□□ -1.23
SCN1A-207ENST00000507401 NCOA6Q14686 2063 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-207ENST00000507401 A0A1B0GTH9 108 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 MYOCOSA0A1B0GUC4 107 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 A0A1B0GVC2 190 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 C1orf226A1L170 272 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 OR14I1A6ND48 311 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 WASHC1A8K0Z3 465 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 A8MT66 165 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 M0R3G1 203 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ACOT7O00154 380 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ADAM10O14672 748 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 PGRMC2O15173 223 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 NDUFB5O43674 189 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 HS6ST1O60243 411 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 OR10H2O60403 315 aa7.37□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF354AO60765 605 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms