RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR4F3Q6IEY1 312 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SPOPLQ6IQ16 392 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRMT9Q6P2P2 845 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF530Q6P9A1 599 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF562Q6V9R5 426 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 KYAT3Q6YP21 454 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TMPRSS11AQ6ZMR5 421 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 LRRC74BQ6ZQY2 392 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 G2E3Q7L622 706 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TRMT1LQ7Z2T5 733 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF546Q86UE3 836 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NT5DC3Q86UY8 548 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 GPALPP1Q8IXQ4 340 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ENTHD1Q8IYW4 607 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CMTM8Q8IZV2 173 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TMEM123Q8N131 208 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CHDHQ8NE62 594 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR51G2Q8NGK0 314 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 OR4A4PQ8NGN8 299 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PHF10Q8WUB8 498 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ACOT11Q8WXI4 607 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ATOH1Q92858 354 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NAT6Q93015 286 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MCHR2Q969V1 340 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TSACCQ96A04 125 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NUS1Q96E22 293 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 WDYHV1Q96HA8 205 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SENP5Q96HI0 755 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 RILPQ96NA2 401 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 WFIKKN1Q96NZ8 548 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 IL4I1Q96RQ9 567 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MICU1Q9BPX6 476 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 RTP3Q9BQQ7 232 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TMEM246Q9BRR3 403 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ULBP2Q9BZM5 246 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TKTL2Q9H0I9 626 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 DPAGT1Q9H3H5 408 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NXF3Q9H4D5 531 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 KAT8Q9H7Z6 458 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TUBG2Q9NRH3 451 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 MRPL17Q9NRX2 175 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 SAMSN1Q9NSI8 373 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PLCXD1Q9NUJ7 323 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 C1orf123Q9NWV4 160 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 PHF11Q9UIL8 331 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 ZNF346Q9UL40 294 aaKnown RBP3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 CLEC4EQ9ULY5 219 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 NPIPA1Q9UND3 350 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 TNNQ9UQP3 1299 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 AP3M1Q9Y2T2 418 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 A3GALT2U3KPV4 340 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 HMGXB3Q12766 1538 aa3.27□□□□□ -1.89
HMGB3P15-201ENST00000507326 USP47Q96K76 1375 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CCDC7Q96M83 1385 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 MAP3K5Q99683 1374 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 GRIN2DO15399 1336 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 STK36Q9NRP7 1315 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TCF20Q9UGU0 1960 aaKnown RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 IGLV5-39A0A0G2JS06 123 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 A0A1W2PRF3 423 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 A0A1W2PRM7 423 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TCRBV7S3A2A0A539 114 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 EFCAB10A6NFE3 127 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CCT8L1PA6NM43 557 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 C17orf100A8MU93 164 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 C2orf74A8MZ97 194 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TMEM114B3SHH9 223 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CYB561D2O14569 222 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 RFXANKO14593 260 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TOX3O15405 576 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 NBR2O15453 112 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 ADAM12O43184 909 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 EMC8O43402 210 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 XRCC2O43543 280 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 SYT7O43581 403 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TSPAN2O60636 221 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 PRAMEF2O60811 474 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 NDUFS6O75380 124 aaKnown RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 KRT33AO76009 404 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CIAO1O76071 339 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 FARS2O95363 451 aaKnown RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 LDOC1O95751 146 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 ALDOBP05062 364 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 FABP1P07148 127 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 SLC35G4P0C7Q5 338 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 SMIM10L1P0DMW3 83 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 FGF5P12034 268 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 H2AFXP16104 143 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 SRD5A1P18405 259 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 PMCHP20382 165 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 EDN2P20800 178 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CA4P22748 312 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 AADACP22760 399 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CD1CP29017 333 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 TACR3P29371 465 aa3.26□□□□□ -1.89
HMGB3P15-201ENST00000507326 CD79BP40259 229 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms