RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TYRP14679 529 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CPN1P15169 458 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CALCRP30988 508 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CCR6P51684 374 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 BLVRAP53004 296 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 VSX2P58304 361 aaPredicted RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 TLE2Q04725 743 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 GPNMBQ14956 572 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 ZNF805Q5CZA5 627 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CEACAM19Q7Z692 300 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 C12orf66Q96MD2 445 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 SLC38A1Q9H2H9 487 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 KLHL28Q9NXS3 571 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 HCN3Q9P1Z3 774 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CHST2Q9Y4C5 530 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 PLSCR5A0PG75 271 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 KIAA0355O15063 1070 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 TMEM127O75204 238 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 STX11O75558 287 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 TPPPO94811 219 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 ELFN1P0C7U0 828 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 NUP62P37198 522 aaPredicted RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 GCGRP47871 477 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CCR8P51685 355 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 PIP5KL1Q5T9C9 394 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 RGS7BPQ6MZT1 257 aaPredicted RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 TFAP2EQ6VUC0 442 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 C3P1Q6ZMU1 363 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 UBE3DQ7Z6J8 389 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 DCUN1D3Q8IWE4 304 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 EID2Q8N6I1 236 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 OR51Q1Q8NH59 317 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 DTD2Q96FN9 168 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 PGLYRP3Q96LB9 341 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 C1QTNF2Q9BXJ5 285 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 SPRTNQ9H040 489 aaPredicted RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 UBQLN3Q9H347 655 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 METTL17Q9H7H0 456 aaPredicted RBP16.55■□□□□ 0.24
NUP54-205ENST00000507257 COQ3Q9NZJ6 369 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 FBXL3Q9UKT7 428 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 CASP8AP2Q9UKL3 1982 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 DAPL1A0PJW8 107 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 CPSF4LA6NMK7 179 aaKnown RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 ATP6V1G2-DDX39BF2Z307 99 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 B3GALNT1O75752 331 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SLC2A10O95528 541 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SERPINA3P01011 423 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SYPP08247 313 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 GIPP09681 153 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 XPAP23025 273 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 TRHRP34981 398 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 NCBP2P52298 156 aaKnown RBP eCLIP16.54■□□□□ 0.24
NUP54-205ENST00000507257 NRG3P56975 720 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 TSPAN5P62079 268 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 UAP1L1Q3KQV9 507 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SLC25A35Q3KQZ1 300 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 ARSIQ5FYB1 569 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 DMKNQ6E0U4 476 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 ARL9Q6T311 187 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 FAM198BQ6UWH4 519 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 OLIG3Q7RTU3 272 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 TRAPPC5Q8IUR0 188 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 NKAIN4Q8IVV8 208 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 NRMQ8IXM6 262 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 TMEM99Q8N816 258 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 ZNF527Q8NB42 609 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 OR2L2Q8NH16 312 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SORCS1Q8WY21 1168 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 KISS1RQ969F8 398 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 OR52A5Q9H2C5 316 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 ING1Q9UK53 422 aaPredicted RBP16.54■□□□□ 0.24
NUP54-205ENST00000507257 SPATA2Q9UM82 520 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 SCML1Q9UN30 329 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 GPR34Q9UPC5 381 aa16.54■□□□□ 0.24
NUP54-205ENST00000507257 A0A1W2PRG6 482 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GSAPA4D1B5 854 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 SLC22A31A6NKX4 558 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 A8MXK9 166 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 LEFTY2O00292 366 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 MAN2B1O00754 1011 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 TSPAN4O14817 238 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ECDO95905 644 aaPredicted RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 HPXP02790 462 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 HMGN2P05204 90 aaKnown RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 ANKRD34CP0C6C1 535 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 GABRR2P28476 465 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 FLT3LGP49771 235 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 SELENOPP49908 381 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 LASP1Q14847 261 aaKnown RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 TCTE1Q5JU00 501 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 C6orf132Q5T0Z8 1188 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 B3GNTL1Q67FW5 361 aaPredicted RBP16.53■□□□□ 0.24
NUP54-205ENST00000507257 OR4C11Q6IEV9 310 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ZNF765Q7L2R6 523 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 OR6V1Q8N148 313 aa16.53■□□□□ 0.24
NUP54-205ENST00000507257 ST8SIA4Q92187 359 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms