RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 NUP54Q7Z3B4 507 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ZCCHC7Q8N3Z6 543 aaKnown RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ZNF321PQ8N8H1 164 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ACOT4Q8N9L9 421 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 FAM83FQ8NEG4 500 aaPredicted RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 OR7G1Q8NGA0 311 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ROBO4Q8WZ75 1007 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 RIT1Q92963 219 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ANKRD9Q96BM1 317 aaPredicted RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 ZBED6CLQ96FA7 236 aaPredicted RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 PGM2Q96G03 612 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 MARK4Q96L34 752 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 TUBA1CQ9BQE3 449 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 AICDAQ9GZX7 198 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 METTL7AQ9H8H3 244 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 SMURF2Q9HAU4 748 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 NGBQ9NPG2 151 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 YAE1D1Q9NRH1 226 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 TBCCD1Q9NVR7 557 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 TEX10Q9NXF1 929 aaPredicted RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 TRMT1Q9NXH9 659 aaKnown RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 KLHL28Q9NXS3 571 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 PACSIN2Q9UNF0 486 aaPredicted RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 EXO1Q9UQ84 846 aaKnown RBP6.04□□□□□ -1.44
NR1I3-224ENST00000507215 SLC6A5Q9Y345 797 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 OARD1Q9Y530 152 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 KIAA1549Q9HCM3 1950 aa6.04□□□□□ -1.44
NR1I3-224ENST00000507215 A0A0G2JN53 185 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 FRG2CA6NGY1 282 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SLC22A20A6NK97 555 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 TMEM233B4DJY2 109 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 PHGDHO43175 533 aaKnown RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 GPR75O95800 540 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 GRPP07492 148 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SLC35E2BP0CK96 405 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SLC35E2P0CK97 266 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 HKR1P10072 659 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ZNF37AP17032 561 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 TBXA2RP21731 343 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SRD5A2P31213 254 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 GGT5P36269 586 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 CASP2P42575 452 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SSR2P43308 183 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 MAGEA3P43357 314 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 RPS13P62277 151 aaKnown RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 HERVK_113P63132 956 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ERVK-8P63133 956 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 PHEXP78562 749 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 TIAL1Q01085 375 aaKnown RBP eCLIP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 TNFRSF17Q02223 184 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 FAM27E3Q08E93 113 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 CAPRIN1Q14444 709 aaKnown RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 NRF1Q16656 503 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 EIPR1Q53HC9 387 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SPANXN3Q5MJ09 141 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ANGPTL8Q6UXH0 198 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ZNF704Q6ZNC4 412 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 GPR180Q86V85 440 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 EXOC3L1Q86VI1 746 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 CNEP1R1Q8N9A8 125 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 OR14L1PQ8NHC6 308 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SLC44A1Q8WWI5 657 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 STARD4Q96DR4 205 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 CMTM7Q96FZ5 175 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ZNF845Q96IR2 970 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 MAPKAP1Q9BPZ7 522 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 AIFM2Q9BRQ8 373 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 TMEM204Q9BSN7 226 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 SPATA5L1Q9BVQ7 753 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 OSBPL11Q9BXB4 747 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ERVK-6Q9BXR3 956 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 BEX2Q9BXY8 128 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 POPDC3Q9HBV1 291 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 HHATLQ9HCP6 504 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 IARS2Q9NSE4 1012 aaKnown RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 DNAJC11Q9NVH1 559 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 FAIMQ9NVQ4 179 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 LYARQ9NX58 379 aaKnown RBP6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ERVK-19Q9WJR5 959 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 ZNF175Q9Y473 711 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
NR1I3-224ENST00000507215 UQCRHLA0A096LP55 91 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.02□□□□□ -1.45
NR1I3-224ENST00000507215 VWC2LB2RUY7 222 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 KDM4EB2RXH2 506 aaPredicted RBP6.02□□□□□ -1.45
NR1I3-224ENST00000507215 OVOL3O00110 214 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 PLOD2O00469 737 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 FGF17O60258 216 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 PEPDP12955 493 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 ZNF708P17019 499 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 RHCEP18577 417 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 ABCD3P28288 659 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 SLC7A1P30825 629 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 SLCO1A2P46721 670 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 LHX2P50458 406 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 CDKN2DP55273 166 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 HNRNPH2P55795 449 aaKnown RBP6.02□□□□□ -1.45
NR1I3-224ENST00000507215 FBXW4P57775 412 aa6.02□□□□□ -1.45
NR1I3-224ENST00000507215 MRPS22P82650 360 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms