RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CENPSQ8N2Z9 138 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 SUMF1Q8NBK3 374 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 MINDY2Q8NBR6 621 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 CSNK1G2-AS1Q8NCQ2 148 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 FAM71CQ8NEG0 241 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 OR4F17Q8NGA8 305 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 OR52J3Q8NH60 311 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 WDR36Q8NI36 951 aaKnown RBP4.7□□□□□ -1.66
HERC4-213ENST00000506515 ACER1Q8TDN7 264 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 LHX4Q969G2 390 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 OR4F4Q96R69 305 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 PSMB7Q99436 277 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 C19orf43Q9BQ61 176 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 MTG1Q9BT17 334 aaPredicted RBP4.7□□□□□ -1.66
HERC4-213ENST00000506515 STARD5Q9NSY2 213 aa4.7□□□□□ -1.66
HERC4-213ENST00000506515 C5orf42Q9H799 3197 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 RIF1Q5UIP0 2472 aaKnown RBP4.69□□□□□ -1.66
HERC4-213ENST00000506515 USP34Q70CQ2 3546 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 LGALS8O00214 317 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 LRRTM2O43300 516 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 IDH1O75874 414 aaKnown RBP4.69□□□□□ -1.66
HERC4-213ENST00000506515 PDE5AO76074 875 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 GJB5O95377 273 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 GOT2P00505 430 aaKnown RBP4.69□□□□□ -1.66
HERC4-213ENST00000506515 RENP00797 406 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 IQCF3P0C7M6 154 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 IL4RP24394 825 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ADORA1P30542 326 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 CD86P42081 329 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 MFAP2P55001 183 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 VCPP55072 806 aaKnown RBP4.69□□□□□ -1.66
HERC4-213ENST00000506515 NAAAQ02083 359 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 SRYQ05066 204 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 FUT7Q11130 342 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 BNIP1Q12981 228 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 CRMP1Q14194 572 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ZSWIM7Q19AV6 140 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 PARP6Q2NL67 630 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 CNPY1Q3B7I2 92 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 VWA2Q5GFL6 755 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 TAF3Q5VWG9 929 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ZSCAN25Q6NSZ9 544 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 CXCL17Q6UXB2 119 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ADAMTSL5Q6ZMM2 481 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ARMCX2Q7L311 632 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 P4HA3Q7Z4N8 544 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ERC1Q8IUD2 1116 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 POM121L12Q8N7R1 296 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 BEST4Q8NFU0 473 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 OR2L2Q8NH16 312 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 TOMM40LQ969M1 308 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 NTNG2Q96CW9 530 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 TSPAN18Q96SJ8 248 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ESM1Q9NQ30 184 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 YAE1D1Q9NRH1 226 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ABCC13Q9NSE7 274 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 GDAP2Q9NXN4 497 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 CIDEBQ9UHD4 219 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 ZNF490Q9ULM2 529 aaPredicted RBP4.69□□□□□ -1.66
HERC4-213ENST00000506515 FZR1Q9UM11 496 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 REV3LO60673 3130 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 TRIOO75962 3097 aa4.69□□□□□ -1.66
HERC4-213ENST00000506515 BRWD1Q9NSI6 2320 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 PHF1O43189 567 aaPredicted RBP4.68□□□□□ -1.66
HERC4-213ENST00000506515 AKR7A3O95154 331 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 NUDT14O95848 222 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 MELTFP08582 738 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 TSPAN8P19075 237 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 DNAJB1P25685 340 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 HAND2P61296 217 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 HERVK_113P63132 956 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ERVK-8P63133 956 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ZFP36L1Q07352 338 aaKnown RBP4.68□□□□□ -1.66
HERC4-213ENST00000506515 ABRAXAS2Q15018 415 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ACSF3Q4G176 576 aaPredicted RBP4.68□□□□□ -1.66
HERC4-213ENST00000506515 C14orf28Q4W4Y0 310 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 NHLRC3Q5JS37 347 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 SEL1L2Q5TEA6 688 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 UNC5DQ6UXZ4 953 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 PRSS48Q7RTY5 328 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 DEFB128Q7Z7B8 93 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 FAM222BQ8WU58 562 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ITLN1Q8WWA0 313 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 NCLNQ969V3 563 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 FAM173AQ9BQD7 235 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ERVK-6Q9BXR3 956 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 RWDD1Q9H446 243 aaPredicted RBP4.68□□□□□ -1.66
HERC4-213ENST00000506515 ACTR8Q9H981 624 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 NYAP2Q9P242 653 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 CDK5RAP2Q96SN8 1893 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 MYH1P12882 1939 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 FAM186AA6NE01 2351 aa4.68□□□□□ -1.66
HERC4-213ENST00000506515 ZFHX2Q9C0A1 2572 aaPredicted RBP4.67□□□□□ -1.66
HERC4-213ENST00000506515 NPIPA5A0A0B4J1W7 369 aa4.67□□□□□ -1.66
HERC4-213ENST00000506515 NPIPA5E9PKD4 350 aa4.67□□□□□ -1.66
HERC4-213ENST00000506515 F5H6K3 240 aa4.67□□□□□ -1.66
HERC4-213ENST00000506515 SDC3O75056 442 aa4.67□□□□□ -1.66
HERC4-213ENST00000506515 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
HERC4-213ENST00000506515 HMGCLP35914 325 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms