RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CRMP1Q14194 572 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 PCK2Q16822 640 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 CFAP157Q5JU67 520 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 ZSCAN25Q6NSZ9 544 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 DPY19L4Q7Z388 723 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 LRRC49Q8IUZ0 686 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 ABHD12Q8N2K0 398 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 DNAJA3Q96EY1 480 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 CRACR2AQ9BSW2 395 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 UPF3BQ9BZI7 483 aaKnown RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 TRIM9Q9C026 710 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 DDX19AQ9NUU7 478 aaKnown RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 RCOR3Q9P2K3 495 aaPredicted RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 RNF6Q9Y252 685 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 MRPL11Q9Y3B7 192 aaKnown RBP4.81□□□□□ -1.64
CHD1-204ENST00000505982 PTPRMP28827 1452 aa4.81□□□□□ -1.64
CHD1-204ENST00000505982 GRIN2DO15399 1336 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ERCC6L2Q5T890 1561 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 IGHV3OR16-10A0A075B7F0 116 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 MAGEB3O15480 346 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 PPIHO43447 177 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 DUX1O43812 170 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 TYROBPO43914 113 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 STX11O75558 287 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 TM7SF2O76062 418 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 KIAA0754O94854 1291 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 UFL1O94874 794 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 CHRNA1P02708 482 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 SNRPCP09234 159 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 CHMLP26374 656 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ETV5P41161 510 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 MAGEA5P43359 124 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 BRCC3P46736 316 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ACADVLP49748 655 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 EMDP50402 254 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ARFIP1P53367 373 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 PAX8Q06710 450 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ABRAXAS2Q15018 415 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 CCL14Q16627 93 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 VWA2Q5GFL6 755 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 MS4A13Q5J8X5 152 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 RFWD3Q6PCD5 774 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 LRRC70Q7Z2Q7 622 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 CEACAM19Q7Z692 300 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 TBCKQ8TEA7 893 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 TTYH2Q9BSA4 534 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ALG12Q9BV10 488 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 SLC25A51Q9H1U9 297 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 ADNPQ9H2P0 1102 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 GPN2Q9H9Y4 310 aaPredicted RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 RBM28Q9NW13 759 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 UTP6Q9NYH9 597 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 RAI14Q9P0K7 980 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 MLXQ9UH92 298 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 EIF3LQ9Y262 564 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 MRPS7Q9Y2R9 242 aaKnown RBP4.8□□□□□ -1.64
CHD1-204ENST00000505982 OR10H1Q9Y4A9 318 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 PXDNLA1KZ92 1463 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 NPATQ14207 1427 aa4.8□□□□□ -1.64
CHD1-204ENST00000505982 RIMBP3CA6NJZ7 1639 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 RIMBP3BA6NNM3 1639 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 ARHGEF10O15013 1369 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 KIAA0232Q92628 1395 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 RIMBP3Q9UFD9 1639 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 PPIAL4CA0A0B4J2A2 164 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 IGHV3-16A0A0C4DH30 117 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 TRBV7-9A0A0J9YWB2 115 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 GSAPA4D1B5 854 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 EPM2AB3EWF7 344 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 K7EQM0 130 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 MTX2O75431 263 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 SEMA4FO95754 770 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 WNT2P09544 360 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 PPIAL4GP0DN37 164 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 H2AFXP16104 143 aaPredicted RBP4.79□□□□□ -1.64
CHD1-204ENST00000505982 SYT1P21579 422 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 PAX7P23759 505 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 CHI3L1P36222 383 aaPredicted RBP4.79□□□□□ -1.64
CHD1-204ENST00000505982 POU3F4P49335 361 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 GBX2P52951 348 aaPredicted RBP4.79□□□□□ -1.64
CHD1-204ENST00000505982 ZNF33BQ06732 778 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 CHI3L2Q15782 390 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 ZIC1Q15915 447 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 TATDN3Q17R31 274 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 C14orf177Q52M58 125 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 CYBRD1Q53TN4 286 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 RABGAP1LQ5R372 815 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 FAM182AQ5T1J6 154 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 PAQR6Q6TCH4 344 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
CHD1-204ENST00000505982 KDELC1Q6UW63 502 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms