RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 Q8N7P7 452 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 OR5AU1Q8NGC0 362 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 OR2A12Q8NGT7 310 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 IL1F10Q8WWZ1 152 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 SDSLQ96GA7 329 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 TECTBQ96PL2 329 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 GSDMCQ9BYG8 508 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 DHX33Q9H6R0 707 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 SPRR3Q9UBC9 169 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 ATP8B3O60423 1300 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 CARMIL1Q5VZK9 1371 aa2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 TDRD6O60522 2096 aaKnown RBP2.83□□□□□ -1.96
TOPBP1-204ENST00000505804 A0A1B0GUL7 405 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 OR6C65A6NJZ3 312 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 FCN1O00602 326 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 STX7O15400 261 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 EFNA2O43921 213 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 JAK2O60674 1132 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 HBQ1P09105 142 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 AZU1P20160 251 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 VDAC1P21796 283 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 KIF5BP33176 963 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 DLSTP36957 453 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 SLC26A2P50443 739 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 NUCB2P80303 420 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 BDH1Q02338 343 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 SCGB2A2Q13296 93 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 MAPK6Q16659 721 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 ASPHD2Q6ICH7 369 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 LRRC8BQ6P9F7 803 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 TFAP2EQ6VUC0 442 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 SLC34A3Q8N130 599 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 LINC01561Q8N1V8 128 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 OR10H4Q8NGA5 316 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 LINC01006Q8NI28 216 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 MRPL13Q9BYD1 178 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 EHD1Q9H4M9 534 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 ISG20L2Q9H9L3 353 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 MRPL39Q9NYK5 338 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 OR1A1Q9P1Q5 309 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 CYTH4Q9UIA0 394 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 XPO7Q9UIA9 1087 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 B9D1Q9UPM9 204 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 USP16Q9Y5T5 823 aa2.82□□□□□ -1.96
TOPBP1-204ENST00000505804 A0A087WZY1 265 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 DIRAS3O95661 229 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 CHRNA1P02708 482 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 STSP08842 583 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 OR8U8P0C7N1 319 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 OTUD4Q01804 1114 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 ATXN7L3Q14CW9 347 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 CELF3Q5SZQ8 465 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 CBLN3Q6UW01 205 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 ANKRD37Q7Z713 158 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 TGIF2LYQ8IUE0 185 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 OR2L5Q8NG80 312 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 MARC2Q969Z3 335 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 IL4I1Q96RQ9 567 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 ZNF184Q99676 751 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 PTGES2Q9H7Z7 377 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 CALHM2Q9HA72 323 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 FANCFQ9NPI8 374 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 TAS2R3Q9NYW6 316 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 RIMS3Q9UJD0 308 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 ANAPC7Q9UJX3 599 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 SMC3Q9UQE7 1217 aa2.81□□□□□ -1.96
TOPBP1-204ENST00000505804 COL16A1Q07092 1604 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ESYT2A0FGR8 921 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 RGSL1A5PLK6 1076 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 FAM231BA6NCW3 169 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 H3BMQ9 156 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 TBL1XO60907 577 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 LYPLA1O75608 230 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 B3GAT3O94766 335 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 AK1P00568 194 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 SEMG1P04279 462 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 IGF1P05019 195 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 CLUP10909 449 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 PDHBP11177 359 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 TNNI3P19429 210 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 SERPINA2P20848 420 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 DRD3P35462 400 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 CD86P42081 329 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 HTD2P86397 168 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 OC90Q02509 493 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 LRRC36Q1X8D7 754 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 CCDC92Q53HC0 331 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 SPATA46Q5T0L3 261 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 METTL11BQ5VVY1 283 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 SCARA5Q6ZMJ2 495 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 HSD17B13Q7Z5P4 300 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 TMEM179BQ7Z7N9 219 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ZSCAN30Q86W11 494 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 ZBTB44Q8NCP5 570 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 NANPQ8TBE9 248 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 CCDC110Q8TBZ0 833 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 FRAT1Q92837 279 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 NEIL2Q969S2 332 aa2.8□□□□□ -1.96
TOPBP1-204ENST00000505804 AKR1E2Q96JD6 320 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms