RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ZNF346Q9UL40 294 aaKnown RBP3.81□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ATP6V1DQ9Y5K8 247 aa3.81□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MYH6P13533 1939 aa3.81□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PIEZO1Q92508 2521 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PLXNA1Q9UIW2 1896 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ASTN1O14525 1302 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TRIOBPQ9H2D6 2365 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PPIAL4EA0A075B759 164 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 A0A1B0GVL5 298 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CLEC18AA5D8T8 446 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C15orf62A8K5M9 175 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 E5RGE8 158 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 WNT9BO14905 357 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CDK14O94921 469 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PLEKHA8P1O95397 391 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 H6PDO95479 791 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CLPTM1O96005 669 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CALCAP01258 141 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PPIAL4FP0DN26 164 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CCNB1P14635 433 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 EZRP15311 586 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NT5EP21589 574 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SRD5A2P31213 254 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HNRNPH1P31943 449 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CASP14P31944 242 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SFTPDP35247 375 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MNDAP41218 407 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ACADSBP45954 432 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PDLIM4P50479 330 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CDH6P55285 790 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CLDN20P56880 219 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HERVK_113P63132 956 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ERVK-8P63133 956 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PHEXP78562 749 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BST2Q10589 180 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GPR176Q14439 515 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HEPACAMQ14CZ8 416 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SYPL1Q16563 259 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PHKG1Q16816 387 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 QRICH1Q2TAL8 776 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ALKBH6Q3KRA9 238 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF528Q3MIS6 628 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ASPRV1Q53RT3 343 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NADSYN1Q6IA69 706 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RTL6Q6ICC9 239 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C18orf65Q6ZTR6 163 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SHFQ7M4L6 423 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DPY19L4Q7Z388 723 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CPEB2Q7Z5Q1 589 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PRUNE1Q86TP1 453 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 VRK2Q86Y07 508 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PALB2Q86YC2 1186 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DCP1BQ8IZD4 617 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ST13P4Q8IZP2 240 aaPredicted RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LGI2Q8N0V4 545 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM123Q8N131 208 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TEX45Q8NA69 505 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FNDC5Q8NAU1 212 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MLKLQ8NB16 471 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CLEC18CQ8NCF0 446 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR5AU1Q8NGC0 362 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR4L1Q8NH43 312 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 THAP6Q8TBB0 222 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ST8SIA1Q92185 356 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CDKL2Q92772 493 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DAZLQ92904 295 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LURAP1Q96LR2 239 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TGM7Q96PF1 710 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 DEFB118Q96PH6 123 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TECTBQ96PL2 329 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 S1PR3Q99500 378 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 KXD1Q9BQD3 176 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C20orf24Q9BUV8 137 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ERVK-6Q9BXR3 956 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NUSAP1Q9BXS6 441 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FRMD8P1Q9BZ68 369 aaPredicted RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 UPF3BQ9BZI7 483 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HDHD2Q9H0R4 259 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RHBGQ9H310 441 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MTHFD2LQ9H903 347 aaPredicted RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LPAR2Q9HBW0 351 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SDHAF3Q9NRP4 125 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SMOXQ9NWM0 555 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MIOSQ9NXC5 875 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MTCH1Q9NZJ7 389 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CTSFQ9UBX1 484 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF639Q9UID6 485 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NSG2Q9Y328 171 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PPIAL4AQ9Y536 164 aa3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SPIN1Q9Y657 262 aaPredicted RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RBBP6Q7Z6E9 1792 aaKnown RBP3.8□□□□□ -1.8
PDLIM1P4-201ENST00000504327 A0A1B0GUH1 482 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LOC390937A0A1W2PQ73 354 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MTMR11A4FU01 709 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANTXRLA6NF34 631 aa3.79□□□□□ -1.8
PDLIM1P4-201ENST00000504327 PDZK1P1A8MUH7 402 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms