RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 CCNCP24863 283 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 UCP1P25874 307 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 HMGB2P26583 209 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 PDHA2P29803 388 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SAA4P35542 130 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 BRCC3P46736 316 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 RWDD2BP57060 319 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 CCNA1P78396 465 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 CHI3L2Q15782 390 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 MAPK6Q16659 721 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SEL1L3Q68CR1 1132 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 C3P1Q6ZMU1 363 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 FRRS1Q6ZNA5 592 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 CARM1Q86X55 608 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 ZNF683Q8IZ20 524 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 OR10G7Q8NGN6 311 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 TRMT10AQ8TBZ6 339 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 FAM3CQ92520 227 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 ART4Q93070 314 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 FBXO32Q969P5 355 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 NT5C3BQ969T7 300 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 ZNF501Q96CX3 271 aaPredicted RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 GMPPAQ96IJ6 420 aaPredicted RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 TCEANC2Q96MN5 208 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 RCHY1Q96PM5 261 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 TTYH2Q9BSA4 534 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 ST6GALNAC5Q9BVH7 336 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 TRIM9Q9C026 710 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SLC25A51Q9H1U9 297 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 NT5DC2Q9H857 520 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 MED20Q9H944 212 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 WDR41Q9HAD4 459 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SPHK2Q9NRA0 654 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 DCAF13Q9NV06 445 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 HYPKQ9NX55 129 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 DUS2Q9NX74 493 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 SPATA7Q9P0W8 599 aa4.03□□□□□ -1.76
SCLT1-206ENST00000503565 EIF3KQ9UBQ5 218 aaKnown RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 KDM6AO15550 1401 aaPredicted RBP4.03□□□□□ -1.76
SCLT1-206ENST00000503565 PALLDQ8WX93 1383 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 A0A087X002 238 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 K7ERI5 159 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 PDLIM1O00151 329 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ZNF208O43345 1280 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 B3GAT3O94766 335 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 IGF1P05019 195 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SFTPCP11686 197 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ZNF44P15621 663 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 XRCC1P18887 633 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 PSMA2P25787 234 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 RPL9P32969 192 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 VCPP55072 806 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SNRPD1P62314 119 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ZNF85Q03923 595 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ZNF177Q13360 481 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SLC39A6Q13433 755 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 CUL2Q13617 745 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 KIAA0141Q14154 515 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 TMEM187Q14656 261 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 EMC2Q15006 297 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 ECSCRQ19T08 205 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 HLA-BQ31612 363 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 CELF3Q5SZQ8 465 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 HHATQ5VTY9 493 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 BTNL3Q6UXE8 466 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SYT10Q6XYQ8 523 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 KIF6Q6ZMV9 814 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 MOB2Q70IA6 237 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 CCDC80Q76M96 950 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 KIAA1328Q86T90 577 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 LRRC49Q8IUZ0 686 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SLC22A9Q8IVM8 553 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 VSTM4Q8IW00 320 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 LRRC43Q8N309 656 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 DRAXINQ8NBI3 349 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 C18orf25Q96B23 403 aaPredicted RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 BIRC7Q96CA5 298 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 USP28Q96RU2 1077 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 NODALQ96S42 347 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 OMDQ99983 421 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 DGCR6LQ9BY27 220 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 LIME1Q9H400 295 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 VPS37BQ9H9H4 285 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 IL1RL2Q9HB29 575 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 PLCXD1Q9NUJ7 323 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 TAS2R16Q9NYV7 291 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 CRLS1Q9UJA2 301 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 GOLGB1Q14789 3259 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 TCF20Q9UGU0 1960 aaKnown RBP4.02□□□□□ -1.77
SCLT1-206ENST00000503565 SCN11AQ9UI33 1791 aa4.02□□□□□ -1.77
SCLT1-206ENST00000503565 DLG5Q8TDM6 1919 aa4.01□□□□□ -1.77
SCLT1-206ENST00000503565 TOGARAM1Q9Y4F4 1720 aa4.01□□□□□ -1.77
SCLT1-206ENST00000503565 VIRMAQ69YN4 1812 aaKnown RBP4.01□□□□□ -1.77
SCLT1-206ENST00000503565 IQCMA0A1B0GVH7 501 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms