RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 HSD11B1LQ7Z5J1 315 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CEACAM19Q7Z692 300 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 TMEM17Q86X19 198 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SYT14Q8NB59 555 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 NPRL2Q8WTW4 380 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 C11orf24Q96F05 449 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SLC41A3Q96GZ6 507 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SLC45A3Q96JT2 553 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ATF6BQ99941 703 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CAPS2Q9BXY5 557 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 POLR3FQ9H1D9 316 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 ABCC13Q9NSE7 274 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 MRPL39Q9NYK5 338 aaKnown RBP4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 MLXQ9UH92 298 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 CYTH4Q9UIA0 394 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 GMPPBQ9Y5P6 360 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SLCO1B1Q9Y6L6 691 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 PPLO60437 1756 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 NALCNQ8IZF0 1738 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 SHPRHQ149N8 1683 aa4.32□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRPM2O94759 1503 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 METP08581 1390 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 MSH6P52701 1360 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 A0A087WYN8 130 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CCDC169A6NNP5 214 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 ARPC3O15145 178 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 JCHAINP01591 159 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 HCKP08631 526 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 BCKDHAP12694 445 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CALB2P22676 271 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 LMO2P25791 158 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 OXTRP30559 389 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CRIP2P52943 208 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 HILS1P60008 231 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 TNFRSF17Q02223 184 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZIC1Q15915 447 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 FILIP1LQ4L180 1135 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 TMEM225Q6GV28 225 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 ARMCX5Q6P1M9 558 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 SYT10Q6XYQ8 523 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CYS1Q717R9 158 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 KIAA1328Q86T90 577 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 LRRC43Q8N309 656 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 ARL14Q8N4G2 192 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 SUMF1Q8NBK3 374 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 BHLHE23Q8NDY6 225 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 FNDC8Q8TC99 324 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 TBCKQ8TEA7 893 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CNDP1Q96KN2 507 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 POM121L2Q96KW2 1035 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 RIT2Q99578 217 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CHCHD5Q9BSY4 110 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 TMEM121Q9BTD3 319 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 CCDC28BQ9BUN5 200 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 GNG12Q9UBI6 72 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 ANAPC7Q9UJX3 599 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 PTBP2Q9UKA9 531 aaKnown RBP4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 NHSL1Q5SYE7 1610 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 SETBP1Q9Y6X0 1596 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 NEXMIFQ5QGS0 1516 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 SRCAPQ6ZRS2 3230 aa4.31□□□□□ -1.72
HMGB1P3-201ENST00000502802 NCOA3Q9Y6Q9 1424 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 PIK3R4Q99570 1358 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 METTL21EPA6NDL7 271 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 A8MXK9 166 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 AP3B1O00203 1094 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF208O43345 1280 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 SEMA4FO95754 770 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 WNT2P09544 360 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 TPSB2P20231 275 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 TBXA2RP21731 343 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 PLOD1Q02809 727 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 ACY1Q03154 408 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 DDX39BQ13838 428 aaKnown RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 TPSAB1Q15661 275 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 PCK2Q16822 640 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 EXOC3L2Q2M3D2 409 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 C2CD6Q53TS8 623 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 MS4A13Q5J8X5 152 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 FAM182AQ5T1J6 154 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 EMBQ6PCB8 327 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 PRSS48Q7RTY5 328 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 UBQLNLQ8IYU4 475 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZSCAN4Q8NAM6 433 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 FLVCR1-AS1Q8TAF5 88 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 CNIH3Q8TBE1 160 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 CRYGNQ8WXF5 182 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 FAM3CQ92520 227 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 TUBGCP3Q96CW5 907 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 SH3YL1Q96HL8 342 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 SYT11Q9BT88 431 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 MCRIP2Q9BUT9 160 aaKnown RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 GCOM2Q9BZD3 368 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 CRNKL1Q9BZJ0 848 aaKnown RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 TUBB1Q9H4B7 451 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 PIPOXQ9P0Z9 390 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms