RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ADAP2Q9NPF8 381 aa6.92□□□□□ -1.3
PDGFC-203ENST00000502773 PRTFDC1Q9NRG1 225 aa6.92□□□□□ -1.3
PDGFC-203ENST00000502773 CBY1Q9Y3M2 126 aa6.92□□□□□ -1.3
PDGFC-203ENST00000502773 TRBV4-1A0A0J9YWV2 114 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 OR5K3A6NET4 321 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RHPN2P1A8MT19 583 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GRXCR1A8MXD5 290 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CHURC1-FNTBB4DL54 471 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 H0YGG7 62 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 WWP2O00308 870 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TRIM3O75382 744 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF254O75437 659 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 UPK1BO75841 260 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 MT-ND5P03915 603 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ALPPL2P10696 532 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CAPZA1P52907 286 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 METAP1P53582 386 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 HSD17B7P56937 341 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ARF3P61204 181 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ACTA2P62736 377 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ACTG2P63267 376 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CDK5Q00535 292 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 MADCAM1Q13477 382 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GALEQ14376 348 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SPCS2Q15005 226 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 MPEG1Q2M385 716 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PLK5Q496M5 336 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 DCST2Q5T1A1 773 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PLEKHG7Q6ZR37 379 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GALNT10Q86SR1 603 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CADM4Q8NFZ8 388 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 OR9A2Q8NGT5 310 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RPLP0P6Q8NHW5 317 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 C1GALT1C1Q96EU7 318 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 MNTQ99583 582 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SLC19A3Q9BZV2 496 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 FZD3Q9NPG1 666 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TM7SF3Q9NS93 570 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 DCAF16Q9NXF7 216 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 NPAP1Q9NZP6 1156 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 APOBEC3BQ9UH17 382 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GMEB2Q9UKD1 530 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CES1P1Q9UKY3 287 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 METTL15A6NJ78 407 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PRR19A6NJB7 356 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 FAM25EA8MYX2 175 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GMDSO60547 372 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 NID1P14543 1247 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 AZGP1P25311 298 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 IDUAP35475 653 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 HAAOP46952 286 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PRPS1P60891 318 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF91Q05481 1191 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CDC20Q12834 499 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 MAP4K2Q12851 820 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SMAD4Q13485 552 aaKnown RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PIN1Q13526 163 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 BICRALQ6AI39 1079 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 C5orf46Q6UWT4 87 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SYT13Q7L8C5 426 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ACBD7Q8N6N7 88 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SLC7A13Q8TCU3 470 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 FGF14Q92915 247 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TCEAL3Q969E4 200 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TSACCQ96A04 125 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 S100PBPQ96BU1 408 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 C12orf57Q99622 126 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SLX1AQ9BQ83 275 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 NDC1Q9BTX1 674 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 SAP130Q9H0E3 1048 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 S1PR5Q9H228 398 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CYB5R1Q9UHQ9 305 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF222Q9UK12 451 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 A4GNTQ9UNA3 340 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PLXNB3Q9ULL4 1909 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 A0A0G2JN53 185 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 WASHC1A8K0Z3 465 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 E9PQ18 207 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 H0YIG0 161 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 PDCD5O14737 125 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 KIAA0513O60268 411 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GALR3O60755 368 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ARL6IP5O75915 188 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 LCKP06239 509 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TACSTD2P09758 323 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 ENPP1P22413 925 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GADD45AP24522 165 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CD27P26842 260 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 HTR1FP30939 366 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-203ENST00000502773 GRK6P43250 576 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 CASP9P55211 416 aa6.91□□□□□ -1.3
PDGFC-203ENST00000502773 RPS7P62081 194 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms