RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ELK4P28324 431 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 GPC1P35052 558 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 FRKP42685 505 aaPredicted RBP15.07■□□□□ 0
TRAPPC3-207ENST00000497251 RFX3P48380 749 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 VSNL1P62760 191 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 KIAA0040Q15053 153 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 PRSS53Q2L4Q9 553 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 EXOC3L2Q2M3D2 409 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 APOOLQ6UXV4 268 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 MTERF4Q7Z6M4 381 aaKnown RBP15.07■□□□□ 0
TRAPPC3-207ENST00000497251 MTERF3Q96E29 417 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 MS4A4EQ96PG1 132 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 CCT7Q99832 543 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 TACO1Q9BSH4 297 aaKnown RBP15.07■□□□□ 0
TRAPPC3-207ENST00000497251 C1orf109Q9NX04 203 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 VDAC3Q9Y277 283 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 TMED5Q9Y3A6 229 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 POLR3HQ9Y535 204 aaPredicted RBP15.07■□□□□ 0
TRAPPC3-207ENST00000497251 DNHD1Q96M86 4753 aa15.07■□□□□ 0
TRAPPC3-207ENST00000497251 ABCA1O95477 2261 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 STAB1Q9NY15 2570 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 A0A1W2PRB8 838 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 SCDO00767 359 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 OXSR1O95747 527 aaPredicted RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 NUDT17P0C025 328 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 PSMA4P25789 261 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 CRHR1P34998 444 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 ASMTP46597 345 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 MANFP55145 182 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 FOXA1P55317 472 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 CARD18P57730 90 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 CTU2Q2VPK5 515 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 PLPPR5Q32ZL2 321 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 ANKRD34AQ69YU3 496 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 EMBQ6PCB8 327 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 C22orf34Q6ZV56 151 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 R3HCC1LQ7Z5L2 792 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 RIBC1Q8N443 379 aaPredicted RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 NUP43Q8NFH3 380 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 OR4C3Q8NH37 302 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 SPATA3Q8NHX4 192 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 EPS8L3Q8TE67 593 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 CPNE4Q96A23 557 aaPredicted RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 PPCDCQ96CD2 204 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 TRMT61AQ96FX7 289 aaKnown RBP15.06■□□□□ 0
TRAPPC3-207ENST00000497251 TRMOQ9BU70 441 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 ACTR6Q9GZN1 396 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 HOXD1Q9GZZ0 328 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 REEP4Q9H6H4 257 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 MED17Q9NVC6 651 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 EMCNQ9ULC0 261 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 CCL27Q9Y4X3 112 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 PRR14LQ5THK1 2151 aa15.06■□□□□ 0
TRAPPC3-207ENST00000497251 GXYLT2A0PJZ3 443 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 TRIM64A6NGJ6 449 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 TRIM64BA6NI03 449 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 G3V2L1 256 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 SMAD7O15105 426 aaKnown RBP15.05■□□□□ -0
TRAPPC3-207ENST00000497251 KCNK2O95069 426 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 IGKV1D-16P01601 117 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 PCSK6P29122 969 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 SLC6A8P48029 635 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 PRIM2P49643 509 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 SUMO3P55854 103 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-207ENST00000497251 ATP5J2P56134 94 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 SLC18A2Q05940 514 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 HSPB3Q12988 150 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 MLC1Q15049 377 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 P2RY6Q15077 328 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 HBMQ6B0K9 141 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 LRIG3Q6UXM1 1119 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 DNAJC14Q6Y2X3 702 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-207ENST00000497251 ZNF551Q7Z340 670 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-207ENST00000497251 PRIMA1Q86XR5 153 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 SLC43A2Q8N370 569 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 NATD1Q8N6N6 113 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 ZNF527Q8NB42 609 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 AENQ8WTP8 325 aaKnown RBP15.05■□□□□ -0
TRAPPC3-207ENST00000497251 HSD17B8Q92506 261 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 PIK3R3Q92569 461 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 OSTF1Q92882 214 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 PLPPR2Q96GM1 343 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 FCRL1Q96LA6 429 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 STACQ99469 402 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 LRTM1Q9HBL6 345 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 DUSP22Q9NRW4 184 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 MID2Q9UJV3 735 aa15.05■□□□□ -0
TRAPPC3-207ENST00000497251 CADP27708 2225 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 SMIM23A6NLE4 172 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 ESPNB1AK53 854 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 CXCL13O43927 109 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 CHEK2O96017 543 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 PROCP04070 461 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 ALOX5P09917 674 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 RPL3P39023 403 aaKnown RBP15.04■□□□□ -0
TRAPPC3-207ENST00000497251 RPS4XP62701 263 aaKnown RBP15.04■□□□□ -0
TRAPPC3-207ENST00000497251 PDE7AQ13946 482 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 TMEM201Q5SNT2 666 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 PPP4R4Q6NUP7 873 aa15.04■□□□□ -0
TRAPPC3-207ENST00000497251 GALNT10Q86SR1 603 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms