RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RFC3P40938 356 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RFX5P48382 616 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ACOT2P49753 483 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RABGGTBP53611 331 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LIMK2P53671 638 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TWF1Q12792 350 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GRM4Q14833 912 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MICBQ29980 383 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF528Q3MIS6 628 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 COX19Q49B96 90 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 VPS26BQ4G0F5 336 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C5orf47Q569G3 176 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FGD3Q5JSP0 725 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 APOBEC3HQ6NTF7 200 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM88Q6PEY1 159 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PLET1Q6UQ28 207 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RAD9BQ6WBX8 426 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DPY19L2P2Q6ZN68 376 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RBPMS2Q6ZRY4 209 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TECPR1Q7Z6L1 1165 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM135Q86UB9 458 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF546Q86UE3 836 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TSPAN33Q86UF1 283 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C9orf62Q8N4C0 152 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DCBLD1Q8N8Z6 715 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FADS6Q8N9I5 356 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BEND2Q8NDZ0 799 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM46DQ8NEK8 389 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR51L1Q8NGJ5 315 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR6M1Q8NGM8 313 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR13C5Q8NGS8 318 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ITFG1Q8TB96 612 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ACOT11Q8WXI4 607 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CPNE2Q96FN4 548 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CNBD2Q96M20 576 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C3orf30Q96M34 536 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GLT1D1Q96MS3 346 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM56Q96MV1 263 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PCDHB18PQ96TA0 734 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR20Q99678 358 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MLST8Q9BVC4 326 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C1QTNF1Q9BXJ1 281 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ACTRT3Q9BYD9 372 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TOR3AQ9H497 397 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RHOFQ9HBH0 211 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC22A11Q9NSA0 550 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RRP7BPQ9NSQ0 103 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM216Q9P0N5 145 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DHCR7Q9UBM7 475 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HEY2Q9UBP5 337 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ERRFI1Q9UJM3 462 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KLHL21Q9UJP4 597 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CDYLQ9Y232 598 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CFAP20Q9Y6A4 193 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM56-RWDD3S4R434 201 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 UGGT2Q9NYU1 1516 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TONSLQ96HA7 1378 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TRBV2A0A0J9YWF9 115 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 UNC119BA6NIH7 251 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM171A2A8MVW0 826 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CDRT15L2A8MXV6 281 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 E7EWF7 191 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DNASE2O00115 360 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB27BO00194 218 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 INPP4BO15327 924 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2J2O76002 312 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 AQP8O94778 261 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SIX3O95343 332 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 LATS1O95835 1130 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 HTR1AP08908 422 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NUDT17P0C025 328 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SBK3P0C264 359 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TYRP14679 529 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MYOGP15173 224 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNE1P15382 129 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CTPS1P17812 591 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 IL12AP29459 219 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 AKT2P31751 481 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A9P48067 706 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NR0B1P51843 470 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CDH11P55287 796 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAP2BP61225 183 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 LSM6P62312 80 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAP1AP62834 184 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DHODHQ02127 395 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 BST2Q10589 180 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 AIMP2Q13155 320 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB31Q13636 194 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GRB14Q14449 540 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GPNMBQ14956 572 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MAPK11Q15759 364 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZBTB6Q15916 424 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 HAGHQ16775 308 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FNDC7Q5VTL7 733 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PRAMEF8Q5VWM4 474 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ANKRD22Q5VYY1 191 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C11orf63Q6NUN7 778 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF790Q6PG37 636 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF562Q6V9R5 426 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms