RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 MAMDC2Q7Z304 686 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 ITLN2Q8WWU7 325 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 ZBTB8AQ96BR9 441 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 SAP130Q9H0E3 1048 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 ZNF385DQ9H6B1 395 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 KLHL14Q9P2G3 628 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 P2RX2Q9UBL9 471 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 LEF1Q9UJU2 399 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 MKLN1Q9UL63 735 aa17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 RPH3AQ9Y2J0 694 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-213ENST00000496785 NPIPA5A0A0B4J1W7 369 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 NPIPA7E9PJI5 369 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 ZIC3O60481 467 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 EIF4E2O60573 245 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 NPIPA8P0DM63 369 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 NR2F1P10589 423 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 UBL4AP11441 157 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PEPDP12955 493 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 ZNF17P17021 662 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 P2RX1P51575 399 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 FADDQ13158 208 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 ART3Q13508 389 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 CD226Q15762 336 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 BCL2A1Q16548 175 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PDZK1Q5T2W1 519 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 LRIF1Q5T3J3 769 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 LRRC74BQ6ZQY2 392 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 LACC1Q8IV20 430 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 ZNF619Q8N2I2 560 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PNPT1Q8TCS8 783 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 WDYHV1Q96HA8 205 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 SH3YL1Q96HL8 342 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 TTYH2Q9BSA4 534 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PAIP1Q9H074 479 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PLEKHB1Q9UF11 243 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 CORO2BQ9UQ03 480 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 PCDHB14Q9Y5E9 798 aa17.45■□□□□ 0.38
CTDSP1-213ENST00000496785 DIDO1Q9BTC0 2240 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 MYO7BQ6PIF6 2116 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 SERINC4A6NH21 518 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 C17orf51A8MQB3 221 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 H0Y3Z8 333 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 CLIC1O00299 241 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 ANGPT2O15123 496 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 ZNF264O43296 627 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 FCMRO60667 390 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 NUDT14O95848 222 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 GP1BBP13224 206 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 POU3F2P20265 443 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 CAPN3P20807 821 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 ADH7P40394 386 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 EEFSECP57772 596 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 DSTNP60981 165 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 TYW3Q6IPR3 259 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 EIF3MQ7L2H7 374 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 MEIOBQ8N635 442 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 TOR1AIP2Q8NFQ8 470 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 ZPLD1Q8TCW7 415 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 CACYBPQ9HB71 228 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 SLC6A13Q9NSD5 602 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 SLC35A3Q9Y2D2 325 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 NDUFAF1Q9Y375 327 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 FAM215AQ9Y5M1 114 aa17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 KLF2Q9Y5W3 355 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-213ENST00000496785 DOPEY1Q5JWR5 2465 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 A1L4Q6 167 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 C7orf72A4D263 438 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 B4DXG7 233 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 TNFRSF21O75509 655 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 UGT2B17O75795 530 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 H6PDO95479 791 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 EPPINO95925 133 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 CSTAP01040 98 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 TCEA1P23193 301 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 CHRNB4P30926 498 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 EIF1P41567 113 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 CRISP3P54108 245 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 NUP107P57740 925 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 ZNF117Q03924 483 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 PMPCAQ10713 525 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 FUT5Q11128 374 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 MAPRE2Q15555 327 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 GTDC1Q4AE62 458 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 ACSF3Q4G176 576 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 COX20Q5RI15 118 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 RIPPLY2Q5TAB7 128 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 FRRS1Q6ZNA5 592 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 CHMP1BQ7LBR1 199 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 TMCO5AQ8N6Q1 288 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 OR10Q1Q8NGQ4 319 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 CA5BP1Q8WTZ4 195 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 SDCCAG3Q96C92 435 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 ZNF317Q96PQ6 595 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 SLC52A3Q9NQ40 469 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 VDAC3Q9Y277 283 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 AP4B1Q9Y6B7 739 aa17.43■□□□□ 0.38
CTDSP1-213ENST00000496785 DOPEY2Q9Y3R5 2298 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms