RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SPECC1L-ADORA2AF8WAN1 911 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 NDUFS8O00217 210 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 ARPC3O15145 178 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 FCMRO60667 390 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 IGSF6O95976 241 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 MBD3O95983 291 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 IGHV3-9P01782 118 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 FCGR3AP08637 254 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 STAG3L3P0CL85 134 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 PPIAL4GP0DN37 164 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 TROVE2P10155 538 aaKnown RBP eCLIP2.94□□□□□ -1.94
CLK1-214ENST00000496205 RALBP11234 206 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 UQCRBP14927 111 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 CYLC1P35663 651 aaPredicted RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 NUCB2P80303 420 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 SPAG1Q07617 926 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 EXOSC2Q13868 293 aaKnown RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 CDKN3Q16667 212 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 PARP6Q2NL67 630 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 TMEM44Q2T9K0 475 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 SPANXN2Q5MJ10 180 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 ACER2Q5QJU3 275 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 C1orf185Q5T7R7 199 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 PRAMEF5Q5TYX0 476 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 AADACL4Q5VUY2 407 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 PRAMEF6Q5VXH4 476 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 DMKNQ6E0U4 476 aaPredicted RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 PAQR6Q6TCH4 344 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 GCNT7Q6ZNI0 430 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 BZW1Q7L1Q6 419 aaKnown RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 TMCO2Q7Z6W1 182 aaPredicted RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 SLC47A2Q86VL8 602 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 IQCF2Q8IXL9 164 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 MNS1Q8NEH6 495 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 OR8J1Q8NGP2 316 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 OR8K3Q8NH51 312 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 NPRL2Q8WTW4 380 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 TSEN15Q8WW01 171 aaKnown RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 OSTF1Q92882 214 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 PEX13Q92968 403 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 C19orf60Q96EN9 201 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 HPDLQ96IR7 371 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 ANKRD27Q96NW4 1050 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 CASD1Q96PB1 797 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 NPY6RQ99463 290 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 CHP1Q99653 195 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 ATF6BQ99941 703 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 IQCGQ9H095 443 aaKnown RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 GPN2Q9H9Y4 310 aaPredicted RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 RPRD1BQ9NQG5 326 aaKnown RBP2.94□□□□□ -1.94
CLK1-214ENST00000496205 WDR45Q9Y484 360 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 CPQQ9Y646 472 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 FKBP7Q9Y680 259 aa2.94□□□□□ -1.94
CLK1-214ENST00000496205 METP08581 1390 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 A0A0J9YVX5 310 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 A0A0J9YWU9 116 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 A0A1W2PNV4 684 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 LRIT2A6NDA9 550 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 LRRC30A6NM36 301 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 RNF212BA8MTL3 300 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 NPIPA2E9PIF3 369 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 E9PQ18 207 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 PDLIM1O00151 329 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 DNALI1O14645 258 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 ALOX15BO15296 676 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 POLR3GO15318 223 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 STX7O15400 261 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 POLR2DO15514 142 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 EFNA2O43921 213 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TPST2O60704 377 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TRIM3O75382 744 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 PDE5AO76074 875 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 GSTA1P08263 222 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 ANXA4P09525 319 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 SLC35G4P0C7Q5 338 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 PNMTP11086 282 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 HNF1AP20823 631 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 PAX7P23759 505 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 NF2P35240 595 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 DLSTP36957 453 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 EPS15P42566 896 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 MAGEA1P43355 309 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 BRCC3P46736 316 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 MRPS6P82932 125 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 CNTN2Q02246 1040 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 SRYQ05066 204 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 FGL1Q08830 312 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 MAB21L1Q13394 359 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TFDP1Q14186 410 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 GANABQ14697 944 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 AGAP7PQ5VUJ5 663 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TAF3Q5VWG9 929 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 LEG1Q6P5S2 330 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 EMBQ6PCB8 327 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 SYT10Q6XYQ8 523 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 ZNF841Q6ZN19 808 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 NLRP9Q7RTR0 991 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 RANBP3LQ86VV4 465 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 CATSPER3Q86XQ3 398 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TGIF2LXQ8IUE1 241 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms