RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ZNF619Q8N2I2 560 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 OR2I1PQ8NGU4 316 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 EFHD2Q96C19 240 aaPredicted RBP9.62□□□□□ -0.87
SAMM50-206ENST00000494795 TBC1D17Q9HA65 648 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 FOLH1BQ9HBA9 442 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 PLGRKTQ9HBL7 147 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 CAB39Q9Y376 341 aaPredicted RBP9.62□□□□□ -0.87
SAMM50-206ENST00000494795 PCNX3Q9H6A9 2034 aa9.62□□□□□ -0.87
SAMM50-206ENST00000494795 DUXAA6NLW8 204 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 SYT5O00445 386 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 BRINP1O60477 761 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 LIMK1P53667 647 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 NXPH1P58417 271 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 SNRPGP62308 76 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 BNC1Q01954 994 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ST3GAL3Q11203 375 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 VWA2Q5GFL6 755 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 PRR22Q8IZ63 422 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 TMCO5AQ8N6Q1 288 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ZSCAN1Q8NBB4 408 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OR8J1Q8NGP2 316 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OR13C2Q8NGS9 318 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OR51Q1Q8NH59 317 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 C16orf52Q8NHV5 167 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 RTN4RQ9BZR6 473 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OSGIN1Q9UJX0 560 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CACNA1EQ15878 2313 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 FAM221BA6H8Z2 402 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 KLF4O43474 513 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 KIAA0513O60268 411 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CLPSP04118 112 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CT45A8P0DMV1 189 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CT45A9P0DMV2 189 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 NID1P14543 1247 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 FOLR1P15328 257 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 RPS4Y1P22090 263 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF829Q3KNS6 432 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CT45A2Q5DJT8 189 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 FAM69BQ5VUD6 431 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 SLC35F3Q8IY50 421 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 MFSD4AQ8N468 514 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 LRRC17Q8N6Y2 441 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OR51A7Q8NH64 312 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 NACC2Q96BF6 587 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CDCA4Q9BXL8 241 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CCDC86Q9H6F5 360 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 AKIP1Q9NQ31 210 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 MPDZO75970 2070 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 K7ESF4 209 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 OIP5O43482 229 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 PIAS2O75928 621 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 IFNA16P05015 189 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 SLC35E2P0CK97 266 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ZNF10P21506 573 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CD1CP29017 333 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ANXA11P50995 505 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 GNA13Q14344 377 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 C16orf87Q6PH81 154 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 RRM2BQ7LG56 351 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CDRT4Q8N9R6 151 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 FNDC8Q8TC99 324 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 RBM18Q96H35 190 aaKnown RBP9.61□□□□□ -0.87
SAMM50-206ENST00000494795 VSTM2LQ96N03 204 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 NUDT22Q9BRQ3 303 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 CDADC1Q9BWV3 514 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 TTTY10Q9BZA0 68 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 MARCH7Q9H992 704 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 PCDHGA3Q9Y5H0 932 aa9.61□□□□□ -0.87
SAMM50-206ENST00000494795 SLC22A1O15245 554 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 GYPBP06028 91 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 POU6F2P78424 691 aaPredicted RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 MXD1Q05195 221 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 LARS2Q15031 903 aaKnown RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 TBC1D25Q3MII6 688 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 SLC27A4Q6P1M0 643 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 CD300LDQ6UXZ3 194 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 SYT14Q8NB59 555 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 ACOT11Q8WXI4 607 aaPredicted RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 TBX5Q99593 518 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 KCNS3Q9BQ31 491 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 C6orf62Q9GZU0 229 aaPredicted RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 TPK1Q9H3S4 243 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 PRTFDC1Q9NRG1 225 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 TESQ9UGI8 421 aaKnown RBP9.6□□□□□ -0.87
SAMM50-206ENST00000494795 TMEM150CB9EJG8 249 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 H3BMH7 237 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 PLD2O14939 933 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 CLEC2LP0C7M8 214 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 IFI30P13284 250 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 NOS3P29474 1203 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 GPR3P46089 330 aa9.6□□□□□ -0.87
SAMM50-206ENST00000494795 SMIM11AP58511 58 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms