RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MLC1Q15049 377 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 CHI3L2Q15782 390 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 PDCD2Q16342 344 aaPredicted RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.63□□□□□ -1.03
MSH5-218ENST00000494646 KRT71Q3SY84 523 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 SPDYE7PQ495Y7 208 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 EEF1A1P5Q5VTE0 462 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ANKRD34AQ69YU3 496 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ZCCHC12Q6PEW1 402 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ZNF474Q6S9Z5 364 aaPredicted RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 CLEC4FQ8N1N0 589 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 OR5AK3PQ8NH89 298 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 PHOSPHO1Q8TCT1 267 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ADAMTS15Q8TE58 950 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 OR5P2Q8WZ92 322 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 COQ8BQ96D53 544 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 DACH2Q96NX9 599 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 WFIKKN1Q96NZ8 548 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 BTBD2Q9BX70 525 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 C20orf27Q9GZN8 174 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 PIGUQ9H490 435 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 TMEM185BQ9H7F4 350 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 KCNK9Q9NPC2 374 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 UBQLN4Q9NRR5 601 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 C6orf203Q9P0P8 240 aaPredicted RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 PACSIN3Q9UKS6 424 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 EIF3LQ9Y262 564 aaKnown RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 PRR14LQ5THK1 2151 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ACANP16112 2415 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 A0A1W2PPR1 153 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 MSTNO14793 375 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 OIP5O43482 229 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 AQP8O94778 261 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 CRHP06850 196 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 CD99P14209 185 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 POU2F1P14859 743 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 DDX5P17844 614 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 IL11P20809 199 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 RPL3P39023 403 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 CD79BP40259 229 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 SLC6A8P48029 635 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 CASP9P55211 416 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ZNF844Q08AG5 666 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 KEAP1Q14145 624 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 CD226Q15762 336 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 EXOC3L2Q2M3D2 409 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 TMEM44Q2T9K0 475 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 LSM12Q3MHD2 195 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 EXOSC6Q5RKV6 272 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 CDC73Q6P1J9 531 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 OLIG3Q7RTU3 272 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 C6orf120Q7Z4R8 191 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 GGNQ86UU5 652 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 WDR75Q8IWA0 830 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 RIMKLAQ8IXN7 391 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ZNF781Q8N8C0 355 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ATP6V1C2Q8NEY4 427 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 B4GALNT2Q8NHY0 566 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 RFWD2Q8NHY2 731 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 POC1BQ8TC44 478 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 NINJ1Q92982 152 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ZC3HAV1LQ96H79 300 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 PRPF18Q99633 342 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 FOXC2Q99958 501 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 PAIP2Q9BPZ3 127 aaKnown RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 DUSP26Q9BV47 211 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ACTRT3Q9BYD9 372 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 RNF122Q9H9V4 155 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 MED17Q9NVC6 651 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 ATAD3AQ9NVI7 634 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 EDARQ9UNE0 448 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 FAF1Q9UNN5 650 aaPredicted RBP8.62□□□□□ -1.03
MSH5-218ENST00000494646 CARD8Q9Y2G2 431 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 DSCAMO60469 2012 aa8.62□□□□□ -1.03
MSH5-218ENST00000494646 C2CD3Q4AC94 2353 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 A0A087WZY1 265 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 A0A0J9YW62 118 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 GTPBP1O00178 669 aaKnown RBP8.61□□□□□ -1.03
MSH5-218ENST00000494646 TNFSF11O14788 317 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 EFNA2O43921 213 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 CXCL13O43927 109 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 CPSF4O95639 269 aaKnown RBP8.61□□□□□ -1.03
MSH5-218ENST00000494646 NUDT14O95848 222 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 CGAP01215 116 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 HRGP04196 525 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 NGFRP08138 427 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 PRPS1L1P21108 318 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 ATP6V1C1P21283 382 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 BGNP21810 368 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 MATN1P21941 496 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 SOAT1P35610 550 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 SLC1A6P48664 564 aa8.61□□□□□ -1.03
MSH5-218ENST00000494646 ZNF41P51814 821 aaPredicted RBP8.61□□□□□ -1.03
MSH5-218ENST00000494646 ABCE1P61221 599 aaKnown RBP8.61□□□□□ -1.03
MSH5-218ENST00000494646 RPS26P62854 115 aaKnown RBP8.61□□□□□ -1.03
MSH5-218ENST00000494646 RAC1P63000 192 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms