RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MATN1P21941 496 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 PHC1P78364 1004 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 BST1Q10588 318 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 CD226Q15762 336 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 OR2A2Q6IF42 318 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 CLECL1Q8IZS7 167 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 CLEC4FQ8N1N0 589 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 OR8J2Q8NGG1 315 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 OR5AK3PQ8NH89 298 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 SFXN5Q8TD22 340 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 SMPDL3BQ92485 455 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 MOAP1Q96BY2 351 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 SH3YL1Q96HL8 342 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-216ENST00000494613 ZNF845Q96IR2 970 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-216ENST00000494613 OR7D2Q96RA2 312 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 GPATCH1Q9BRR8 931 aaKnown RBP14.05□□□□□ -0.16
LIMS2-216ENST00000494613 NUF2Q9BZD4 464 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 DPY30Q9C005 99 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 STOML1Q9UBI4 398 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 PCDHGB4Q9UN71 923 aa14.05□□□□□ -0.16
LIMS2-216ENST00000494613 PRSS51A0A1B0GVH4 220 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 A6NNC1 897 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 RNASET2O00584 256 aaKnown RBP14.04□□□□□ -0.16
LIMS2-216ENST00000494613 ANKRD28O15084 1053 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 SCN2BO60939 215 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 KRT16P08779 473 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 LBPP18428 481 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 ATP6V1C1P21283 382 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 KIR2DL2P43627 348 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-216ENST00000494613 OCRLQ01968 901 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 TESK1Q15569 626 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 SGCBQ16585 318 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 DCST2Q5T1A1 773 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 BHLHB9Q6PI77 547 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 BTLAQ7Z6A9 289 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 GGNQ86UU5 652 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 MED12LQ86YW9 2145 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 MISPQ8IVT2 679 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 KIRREL3Q8IZU9 778 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 GTPBP8Q8N3Z3 284 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-216ENST00000494613 B4GALNT2Q8NHY0 566 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 PHOSPHO1Q8TCT1 267 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 SDF2Q99470 211 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 LIME1Q9H400 295 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 NEUROD4Q9HD90 331 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 MED17Q9NVC6 651 aa14.04□□□□□ -0.16
LIMS2-216ENST00000494613 SPG11Q96JI7 2443 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 NPIPA5A0A0B4J1W7 369 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 TMEM120BA0PK00 339 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 NPIPA7E9PJI5 369 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 GTPBP1O00178 669 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 MSTNO14793 375 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 NPIPA8P0DM63 369 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 PSMA4P25789 261 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 DNAJA1P31689 397 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 ATP12AP54707 1039 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 RPS3AP61247 264 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 RAC1P63000 192 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 SORDQ00796 357 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 FAM27E3Q08E93 113 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 PON3Q15166 354 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 BEND6Q5SZJ8 279 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 WDR75Q8IWA0 830 aaKnown RBP14.03□□□□□ -0.16
LIMS2-216ENST00000494613 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 CNEP1R1Q8N9A8 125 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 OR5D16Q8NGK9 328 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 FNDC9Q8TBE3 224 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 POC1BQ8TC44 478 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 ZBTB8AQ96BR9 441 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 RNF122Q9H9V4 155 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 THAP1Q9NVV9 213 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 PACSIN3Q9UKS6 424 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 CARD8Q9Y2G2 431 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 ZNF175Q9Y473 711 aa14.03□□□□□ -0.16
LIMS2-216ENST00000494613 DUXAA6NLW8 204 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 NPIPB9F8W1W9 429 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 EIF1AYO14602 144 aaKnown RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 OIP5O43482 229 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 EFNA2O43921 213 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 SMNDC1O75940 238 aaKnown RBP eCLIP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 AQP8O94778 261 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 CPSF4O95639 269 aaKnown RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 CGAP01215 116 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 LINGO3P0C6S8 592 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 SOAT1P35610 550 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 CPA2P48052 419 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 RNF144AP50876 292 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 ZNF41P51814 821 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 SLC18A1P54219 525 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 CASP9P55211 416 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 MAGOHP61326 146 aaKnown RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 RPS26P62854 115 aaKnown RBP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 PLPPR5Q32ZL2 321 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
LIMS2-216ENST00000494613 ANXA8L1Q5VT79 327 aa14.02□□□□□ -0.17
LIMS2-216ENST00000494613 VWA1Q6PCB0 445 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms