RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 AQP5P55064 265 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 GFRA1P56159 465 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 PER3P56645 1201 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 FUT5Q11128 374 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 SPDYE7PQ495Y7 208 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 GXYLT1Q4G148 440 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 WIPI1Q5MNZ9 446 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-217ENST00000494395 DCST1Q5T197 706 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 DCST2Q5T1A1 773 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.96□□□□□ -1.14
ITGB1-217ENST00000494395 CCNJQ5T5M9 372 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 VASNQ6EMK4 673 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 RTL6Q6ICC9 239 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 OR5M10Q6IEU7 315 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 HEPHL1Q6MZM0 1159 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 CGB2Q6NT52 195 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 BHLHB9Q6PI77 547 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 C3P1Q6ZMU1 363 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 MSANTD1Q6ZTZ1 278 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 REC114Q7Z4M0 266 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 MARCH3Q86UD3 253 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 COX18Q8N8Q8 333 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 RFWD2Q8NHY2 731 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 ADAMTS15Q8TE58 950 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 JADE3Q92613 823 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 SLC35G5Q96KT7 338 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 OR52E6Q96RD3 313 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 KLHDC3Q9BQ90 382 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 SLC35A5Q9BS91 424 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 OR51I1Q9H343 314 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 TP63Q9H3D4 680 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-217ENST00000494395 CCDC134Q9H6E4 229 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 LDAHQ9H6V9 325 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 MED4Q9NPJ6 270 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 PNPLA3Q9NST1 481 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 FAF1Q9UNN5 650 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-217ENST00000494395 PCDHGB3Q9Y5G1 929 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 FAM215AQ9Y5M1 114 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 HEATR5AQ86XA9 2040 aa7.96□□□□□ -1.14
ITGB1-217ENST00000494395 SPTAN1Q13813 2472 aaKnown RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 SPTBN1Q01082 2364 aaKnown RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 FAM234BA2RU67 622 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CCDC154A6NI56 674 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CPSF4O95639 269 aaKnown RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ANGPTL1O95841 491 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 GUSBP08236 651 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CD1EP15812 388 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 BMP7P18075 431 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 MATN1P21941 496 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 RFX3P48380 749 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 POLR2JP52435 117 aaKnown RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CASP6P55212 293 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 B3GALT5-AS1P59052 145 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 IRX1P78414 480 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 LRRC74AQ0VAA2 488 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 RCAN2Q14206 197 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CDSNQ15517 529 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 CD226Q15762 336 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ARHGAP11BQ3KRB8 267 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 KLHL26Q53HC5 615 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 MTFR2Q6P444 385 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 LINC00114Q6XXX2 140 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ULK2Q8IYT8 1036 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 MIER2Q8N344 545 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ARFGAP2Q8N6H7 521 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 VPS37AQ8NEZ2 397 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 OR5M9Q8NGP3 310 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ZFP90Q8TF47 636 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 GTF2H4Q92759 462 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 VPS33AQ96AX1 596 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 SARAFQ96BY9 339 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 THOC1Q96FV9 657 aaKnown RBP7.95□□□□□ -1.14
ITGB1-217ENST00000494395 SDF2Q99470 211 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ZBTB18Q99592 522 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 TIMP4Q99727 224 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 G6PC3Q9BUM1 346 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 UGT2B28Q9BY64 529 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 PRDM14Q9GZV8 571 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF350Q9GZX5 532 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 DSN1Q9H410 356 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 UBQLN4Q9NRR5 601 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 MED11Q9P086 117 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 PPP4R1LQ9P1A2 415 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 PCDHGB4Q9UN71 923 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 SLC6A5Q9Y345 797 aa7.95□□□□□ -1.14
ITGB1-217ENST00000494395 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 NPIPA5A0A0B4J1W7 369 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 CENPVL1A0A0U1RR11 272 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 DUXAA6NLW8 204 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 KDM4EB2RXH2 506 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-217ENST00000494395 NPIPA7E9PJI5 369 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 HMGN4O00479 90 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 RFXANKO14593 260 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 KIAA0513O60268 411 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 WDR1O75083 606 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 TRAPPC6AO75865 159 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 AK1P00568 194 aa7.94□□□□□ -1.14
ITGB1-217ENST00000494395 NPIPA8P0DM63 369 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms