RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FOXF2Q12947 444 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 GANABQ14697 944 aaKnown RBP13.28□□□□□ -0.28
ATG4B-224ENST00000494132 GPR68Q15743 365 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 DPY19L1Q2PZI1 675 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATG4B-224ENST00000494132 POMZP3Q6PJE2 187 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 ZNF295-AS1Q8N0V1 137 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 GCNT2Q8N0V5 402 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 OR9I1Q8NGQ6 314 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 MBD3L2Q8NHZ7 208 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-224ENST00000494132 ZPLD1Q8TCW7 415 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 DTNBP1Q96EV8 351 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 OR52E6Q96RD3 313 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 SDF2Q99470 211 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 SLC35A5Q9BS91 424 aa13.28□□□□□ -0.28
ATG4B-224ENST00000494132 FAM47E-STBD1D6RA91 191 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 DVL2O14641 736 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 UBDO15205 165 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 HCRTR2O43614 444 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 FCMRO60667 390 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 TGM6O95932 706 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 PGRP06401 933 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 NGFRP08138 427 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 PEPDP12955 493 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 DLX5P56178 289 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 PPP2R2AP63151 447 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.299e-13■■■■■ 31.5
ATG4B-224ENST00000494132 PDCD4Q53EL6 469 aaKnown RBP13.27□□□□□ -0.29
ATG4B-224ENST00000494132 SAXO2Q658L1 398 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 BHLHB9Q6PI77 547 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 CBLN3Q6UW01 205 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 LSRQ86X29 649 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-224ENST00000494132 GRAMD2AQ8IUY3 354 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 PNPT1Q8TCS8 783 aaKnown RBP13.27□□□□□ -0.29
ATG4B-224ENST00000494132 ACTRT2Q8TDY3 377 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 XAGE5Q8WWM1 108 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 INTS12Q96CB8 462 aaKnown RBP13.27□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF845Q96IR2 970 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-224ENST00000494132 C7orf26Q96N11 449 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 PANX1Q96RD7 426 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 ZBTB18Q99592 522 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 RUBCNLQ9H714 662 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 TMEM185BQ9H7F4 350 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 CLCF1Q9UBD9 225 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 MKLN1Q9UL63 735 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.29
ATG4B-224ENST00000494132 A0A1W2PQD3 144 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 HMGB1P1B2RPK0 211 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-224ENST00000494132 NUDT14O95848 222 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 TMIGD3P0DMS9 266 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-224ENST00000494132 IDO1P14902 403 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 IGFBP2P18065 325 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 UQCRC1P31930 480 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 ATP12AP54707 1039 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 FUT5Q11128 374 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 SLC25A35Q3KQZ1 300 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 PDZK1Q5T2W1 519 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 PPP4R4Q6NUP7 873 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 EPGNQ6UW88 154 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF621Q6ZSS3 439 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 C16orf62Q7Z3J2 963 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 P4HA3Q7Z4N8 544 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 ADGRE4PQ86SQ3 457 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 RNF130Q86XS8 419 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 MEIOBQ8N635 442 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 ACBD4Q8NC06 268 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 FIG4Q92562 907 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
ATG4B-224ENST00000494132 RNF145Q96MT1 663 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 CCDC115Q96NT0 180 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 PIGQQ9BRB3 760 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 PINK1Q9BXM7 581 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 SLC6A13Q9NSD5 602 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 INTS9Q9NV88 658 aaKnown RBP13.26□□□□□ -0.29
ATG4B-224ENST00000494132 MED17Q9NVC6 651 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 BTNL2Q9UIR0 455 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 KCNE5Q9UJ90 142 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 ADGRG4Q8IZF6 3080 aa13.26□□□□□ -0.29
ATG4B-224ENST00000494132 CCDC154A6NI56 674 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 DUXAA6NLW8 204 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 EEF1E1-BLOC1S5C9J1V9 151 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 EEF1E1O43324 174 aaKnown RBP13.25□□□□□ -0.29
ATG4B-224ENST00000494132 SLC22A3O75751 556 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 CYP7B1O75881 506 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 IL11P20809 199 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 CTSSP25774 331 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 LCN1P31025 176 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 CCR4P51679 360 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF41P51814 821 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms