RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DEDD2Q8WXF8 326 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 GATAD2BQ8WXI9 593 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 FAM122AQ96E09 287 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 AHCYL2Q96HN2 611 aaKnown RBP10.71□□□□□ -0.69
RFC4-214ENST00000494047 FAM46AQ96IP4 442 aaKnown RBP10.71□□□□□ -0.69
RFC4-214ENST00000494047 HYLS1Q96M11 299 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 SECISBP2Q96T21 854 aaKnown RBP10.71□□□□□ -0.69
RFC4-214ENST00000494047 ATF6BQ99941 703 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 ZNF559Q9BR84 538 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 ZNF350Q9GZX5 532 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 TBC1D17Q9HA65 648 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 TIGARQ9NQ88 270 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 CMC2Q9NRP2 79 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 BABAM2Q9NXR7 383 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 PCOLCE2Q9UKZ9 415 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 CA14Q9ULX7 337 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 ATG4BQ9Y4P1 393 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 NOX1Q9Y5S8 564 aa10.71□□□□□ -0.69
RFC4-214ENST00000494047 TRPM6Q9BX84 2022 aa10.71□□□□□ -0.7
RFC4-214ENST00000494047 PLXND1Q9Y4D7 1925 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TBC1D3EA0A087X179 549 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 IGKV1-8A0A0C4DH67 115 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 CPSF4LA6NMK7 179 aaKnown RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 WASHC1A8K0Z3 465 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 LRRTM2O43300 516 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 RNF13O43567 381 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 LCMT2O60294 686 aaKnown RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 RNGTTO60942 597 aaKnown RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 KAT7O95251 611 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 EPPINO95925 133 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 PDGFBP01127 241 aaPredicted RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 ADRA2AP08913 450 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 NID1P14543 1247 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GNSP15586 552 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 CELP19835 753 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 C4BPBP20851 252 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 AZGP1P25311 298 aaKnown RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 PSMB5P28074 263 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 DRD3P35462 400 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 PLA2G5P39877 138 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 MC3RP41968 323 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TNFRSF4P43489 277 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 CTBP2P56545 445 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GNG2P59768 71 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 FABP5Q01469 135 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 IFITM2Q01629 132 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 HSF2Q03933 536 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 LGALS3BPQ08380 585 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 EFR3AQ14156 821 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GALEQ14376 348 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TCEA2Q15560 299 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GAB4Q2WGN9 574 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 NIPAL3Q6P499 406 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 VITQ6UXI7 678 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 FRRS1Q6ZNA5 592 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TMPRSS11FQ6ZWK6 438 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 HDDC2Q7Z4H3 204 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 GDF7Q7Z4P5 450 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 AMIGO1Q86WK6 493 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 PAQR7Q86WK9 346 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 POMGNT2Q8NAT1 580 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 ADAMTS18Q8TE60 1221 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TM9SF4Q92544 642 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 AKAP1Q92667 903 aaKnown RBP eCLIP10.7□□□□□ -0.7
RFC4-214ENST00000494047 THRSPQ92748 146 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TRMT61AQ96FX7 289 aaKnown RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 OR2M4Q96R27 311 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 PLA2G12AQ9BZM1 189 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 PLA2G2FQ9BZM2 168 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 EGLN3Q9H6Z9 239 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 SLC6A20Q9NP91 592 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 SEMA4GQ9NTN9 838 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 TOR4AQ9NXH8 423 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 ABRACLQ9P1F3 81 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 C5AR2Q9P296 337 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 C19orf53Q9UNZ5 99 aaPredicted RBP10.7□□□□□ -0.7
RFC4-214ENST00000494047 SLC35A3Q9Y2D2 325 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 MED31Q9Y3C7 131 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 SIT1Q9Y3P8 196 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 RNF215Q9Y6U7 377 aa10.7□□□□□ -0.7
RFC4-214ENST00000494047 COL4A3Q01955 1670 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 TRAV1-2A0A0B4J238 106 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 PRR23D1E9PI22 279 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 J3QRE1 110 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GTPBP1O00178 669 aaKnown RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 TNFSF14O43557 240 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 PLRG1O43660 514 aaKnown RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 PLPP2O43688 288 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 PLOD3O60568 738 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GATBO75879 557 aaKnown RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 ATP1B1P05026 303 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 PRR23D2P0DMB1 279 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 SAGP10523 405 aaPredicted RBP10.69□□□□□ -0.7
RFC4-214ENST00000494047 ALAS2P22557 587 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 CERS1P27544 350 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 GDI1P31150 447 aa10.69□□□□□ -0.7
RFC4-214ENST00000494047 VIPR2P41587 438 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms