RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 DHPSP49366 369 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 YBEYP58557 167 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 RPS8P62241 208 aaKnown RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 TLE4Q04727 773 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 DNM1P46Q6ZS02 220 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 Q7L0L9 218 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 ANKRD37Q7Z713 158 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 KDM8Q8N371 416 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 ALLCQ8N6M5 410 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 ZNF713Q8N859 430 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 THAP9Q9H5L6 903 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 ZNF331Q9NQX6 463 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-216ENST00000493758 CD274Q9NZQ7 290 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 CRLS1Q9UJA2 301 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 RAB26Q9ULW5 256 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 KNSTRNQ9Y448 316 aa2.66□□□□□ -1.98
ITGB1-216ENST00000493758 PLEKHG1Q9ULL1 1385 aa2.65□□□□□ -1.98
ITGB1-216ENST00000493758 SYCE3A1L190 88 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 ZNF705EA8MWA4 302 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 CA11O75493 328 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 ANXA4P09525 319 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 VDAC1P21796 283 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 GCKP35557 465 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 NUP107P57740 925 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 BDH1Q02338 343 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 AP1B1Q10567 949 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 AGBL2Q5U5Z8 902 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 OR6B2Q6IFH4 312 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 WDR74Q6RFH5 385 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 LRRC70Q7Z2Q7 622 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 TICAM2Q86XR7 235 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 EFCAB13Q8IY85 973 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 ZNF100Q8IYN0 542 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 ELMOD2Q8IZ81 293 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 CERS5Q8N5B7 392 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 ZNF433Q8N7K0 673 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 MRPL43Q8N983 215 aaKnown RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 OR2AP1Q8NGE2 309 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 MARC2Q969Z3 335 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 NRTNQ99748 197 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 SPXQ9BT56 116 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 CHRDL1Q9BU40 450 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 POLR3FQ9H1D9 316 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-216ENST00000493758 SH2D2AQ9NP31 389 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 C1orf123Q9NWV4 160 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 FETUBQ9UGM5 382 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 FOXJ3Q9UPW0 622 aa2.65□□□□□ -1.99
ITGB1-216ENST00000493758 COL4A4P53420 1690 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 PSMB11A5LHX3 300 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 TUBAL3A6NHL2 446 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 WASH3PC4AMC7 463 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 STX11O75558 287 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 ANXA3P12429 323 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 TSPAN8P19075 237 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 OAS2P29728 719 aaKnown RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 ATXN3P54252 364 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 GABPB1Q06547 395 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 EXOSC2Q13868 293 aaKnown RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 OR8G2PQ6IF36 304 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 PLBD1Q6P4A8 553 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 WASH2PQ6VEQ5 465 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 TMEM26Q6ZUK4 368 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 LPCAT2Q7L5N7 544 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 SNX32Q86XE0 403 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 BCORP1Q8N888 145 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 ZBTB44Q8NCP5 570 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 STKLD1Q8NE28 680 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 NEIL3Q8TAT5 605 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 DNAJA4Q8WW22 397 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 SLC5A11Q8WWX8 675 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 OR1E3Q8WZA6 343 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 SRXN1Q9BYN0 137 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 CHIAQ9BZP6 476 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 MMP26Q9NRE1 261 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 WRAP73Q9P2S5 460 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-216ENST00000493758 AP4B1Q9Y6B7 739 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 RPGRIP1LQ68CZ1 1315 aa2.64□□□□□ -1.99
ITGB1-216ENST00000493758 CDC42BPBQ9Y5S2 1711 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 PP2D1A8MPX8 630 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 ABCD4O14678 606 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 AKR7A3O95154 331 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 OPN1LWP04000 364 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 CCDC192P0DO97 292 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 IL10P22301 178 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 ATP5A1P25705 553 aaKnown RBP2.63□□□□□ -1.99
ITGB1-216ENST00000493758 RIPPLY1Q0D2K3 151 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 IRGCQ6NXR0 463 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 ARMCX2Q7L311 632 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 LCA5Q86VQ0 697 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 BLOC1S5Q8TDH9 187 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 SDSLQ96GA7 329 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 VSTM2LQ96N03 204 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 ROPN1Q9HAT0 212 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-216ENST00000493758 FANCFQ9NPI8 374 aa2.63□□□□□ -1.99
ITGB1-216ENST00000493758 MRPL39Q9NYK5 338 aaKnown RBP2.63□□□□□ -1.99
ITGB1-216ENST00000493758 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms