RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 MMP25Q9NPA2 562 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 NTMQ9P121 344 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TMEM181Q9P2C4 612 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ABCD2Q9UBJ2 740 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 PACSIN3Q9UKS6 424 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 C2orf92A0A1B0GVN3 265 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 DUXAA6NLW8 204 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 C5orf58C9J3I9 102 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 CCL21O00585 134 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 NME4O00746 187 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 GMNNO75496 209 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 PDE5AO76074 875 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 PSMG1O95456 288 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 STAMBPO95630 424 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 AGR2O95994 175 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 C1QCP02747 245 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 IGKV3-11P04433 115 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 OR12D1P0DN82 309 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 S1PR1P21453 382 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 MAGEA8P43361 318 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 SLC37A1P57057 533 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 EEFSECP57772 596 aaKnown RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 HPCAP84074 193 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 DUSP8Q13202 625 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 RGNQ15493 299 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 NNATQ16517 81 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 KRTCAP3Q53RY4 240 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 CDC73Q6P1J9 531 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 ZCCHC12Q6PEW1 402 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 WDR53Q7Z5U6 358 aaPredicted RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 SLC15A3Q8IY34 581 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 BEST3Q8N1M1 668 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 RNF148Q8N7C7 305 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF615Q8N8J6 731 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 TNIP2Q8NFZ5 429 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 OR2T12Q8NG77 320 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 OR5D16Q8NGK9 328 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 GPR151Q8TDV0 419 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 GIMAP5Q96F15 307 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 OR7D2Q96RA2 312 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 SPATA9Q9BWV2 254 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 ITPAQ9BY32 194 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 DEFB126Q9BYW3 111 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 KAT8Q9H7Z6 458 aaKnown RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 CHST11Q9NPF2 352 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 EXD2Q9NVH0 621 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 THUMPD1Q9NXG2 353 aaKnown RBP11.15□□□□□ -0.62
UPF3A-210ENST00000493727 OR10H1Q9Y4A9 318 aa11.15□□□□□ -0.62
UPF3A-210ENST00000493727 TTC36A6NLP5 189 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 GSTA4O15217 222 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 ASNA1O43681 348 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 CIB2O75838 187 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 ZFAND5O76080 213 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 CLPSP04118 112 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 ACP2P11117 423 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 GPX2P18283 190 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 MST1P26927 711 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 GABRA3P34903 492 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 GSK3BP49841 420 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 EMDP50402 254 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 TUBA3CQ13748 450 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 KRTAP21-3Q3LHN1 58 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 TUBA3EQ6PEY2 450 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 XKRXQ6PP77 449 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 C16orf62Q7Z3J2 963 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 SERPINA11Q86U17 422 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 SLC44A2Q8IWA5 706 aaPredicted RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 C9orf40Q8IXQ3 194 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 ULK2Q8IYT8 1036 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 OR5L2Q8NGL0 311 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 MIPOL1Q8TD10 442 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 RAB8BQ92930 207 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 REXO5Q96IC2 774 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 CLPTM1LQ96KA5 538 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 VSTM2LQ96N03 204 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 RAB3IPQ96QF0 476 aaPredicted RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 STACQ99469 402 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 LMF2Q9BU23 707 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 WWTR1Q9GZV5 400 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 SERHL2Q9H4I8 314 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 Q9N2J8 555 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 P2RX2Q9UBL9 471 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 PPIEQ9UNP9 301 aaKnown RBP11.14□□□□□ -0.63
UPF3A-210ENST00000493727 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 GMEB1Q9Y692 573 aa11.14□□□□□ -0.63
UPF3A-210ENST00000493727 ELOVL7A1L3X0 281 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 HMGN4O00479 90 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms