RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 HINT3Q9NQE9 182 aaKnown RBP12.32□□□□□ -0.44
PTK7-218ENST00000493339 MARK1Q9P0L2 795 aa12.32□□□□□ -0.44
PTK7-218ENST00000493339 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
PTK7-218ENST00000493339 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
PTK7-218ENST00000493339 PDE4DIPQ5VU43 2346 aa12.32□□□□□ -0.44
PTK7-218ENST00000493339 VNN2O95498 520 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 TGM6O95932 706 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 EGFP01133 1207 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 IGF2P01344 180 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 RAB3BP20337 219 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 SERPINA4P29622 427 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 GK2Q14410 553 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 PIP5KL1Q5T9C9 394 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 PLBD1Q6P4A8 553 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 GSG1LQ6UXU4 331 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 TPRG1Q6ZUI0 275 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 OR52B4Q8NGK2 314 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 TMEM169Q96HH4 297 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 SLC6A20Q9NP91 592 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 DAPL1A0PJW8 107 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 PRSS44E7EML9 344 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 F8W036 122 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 TSPAN6O43657 245 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 EPPINO95925 133 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 GLAP06280 429 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 GABRA1P14867 456 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 PDHA2P29803 388 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 CCR9P51686 369 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 MC2RQ01718 297 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 APOOLQ6UXV4 268 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 CXXC5Q7LFL8 322 aaKnown RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
PTK7-218ENST00000493339 PRRC1Q96M27 445 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 OR1F2PQ96R84 312 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 IFT27Q9BW83 186 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 HRASLSQ9HDD0 168 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 TRIM36Q9NQ86 728 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 ERVK-19Q9WJR5 959 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 UNC80Q8N2C7 3258 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 DOCK6Q96HP0 2047 aa12.31□□□□□ -0.44
PTK7-218ENST00000493339 IGLV3-16A0A075B6K0 115 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SIGLEC6O43699 453 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 RB1P06400 928 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 HTR1FP30939 366 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 UBE2MP61081 183 aaKnown RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 PLD1Q13393 1074 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ELP2Q6IA86 826 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SEZ6L2Q6UXD5 910 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SERPINA12Q8IW75 414 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 HDDC3Q8N4P3 179 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 NKX6-2Q9C056 277 aaPredicted RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 NOX3Q9HBY0 568 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 GALR3O60755 368 aaPredicted RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 PTHLHP12272 177 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 RAP2BP61225 183 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 C18orf63Q68DL7 685 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 METTL3Q86U44 580 aaKnown RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SMPDL3AQ92484 453 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 P2RX2Q9UBL9 471 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 KLK11Q9UBX7 282 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 EXOGQ9Y2C4 368 aaKnown RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 NUMA1Q14980 2115 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ZNF840PA6NDX5 716 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 J3QLW9 94 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ABCD4O14678 606 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 RLN2P04090 185 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 UCHL1P09936 223 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ZNF19P17023 458 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SHC2P98077 582 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 DYRK1AQ13627 763 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ACSM3Q53FZ2 586 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 MPP7Q5T2T1 576 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 CMIPQ8IY22 773 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 OR56A3Q8NH54 315 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 KAT2AQ92830 837 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
PTK7-218ENST00000493339 TEX12Q9BXU0 123 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 CWH43Q9H720 699 aa12.3□□□□□ -0.44
PTK7-218ENST00000493339 ELAC1Q9H777 363 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms