RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GNA13Q14344 377 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 GANABQ14697 944 aaKnown RBP12.69□□□□□ -0.38
CCM2-217ENST00000492883 RUNDC3AQ59EK9 446 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 AAGABQ6PD74 315 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 C3P1Q6ZMU1 363 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 FRRS1Q6ZNA5 592 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 HMGN2P46Q86SG4 172 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 EID3Q8N140 333 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 ABTB1Q969K4 478 aaPredicted RBP12.69□□□□□ -0.38
CCM2-217ENST00000492883 ZG16BQ96DA0 208 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 C1GALT1C1Q96EU7 318 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 SFXN2Q96NB2 322 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 CGREF1Q99674 301 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 TIMP4Q99727 224 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
CCM2-217ENST00000492883 SLC38A1Q9H2H9 487 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 ERRFI1Q9UJM3 462 aaPredicted RBP12.69□□□□□ -0.38
CCM2-217ENST00000492883 CARD8Q9Y2G2 431 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 CNTRLQ7Z7A1 2325 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 KALRNO60229 2985 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 TRBV5-3A0A0A0MS03 114 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 BBIP1A8MTZ0 92 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 FBP2O00757 339 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 MRASO14807 208 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ZNF264O43296 627 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 TNFRSF21O75509 655 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ACTL6AO96019 429 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 CSTAP01040 98 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 UBL4AP11441 157 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCM2-217ENST00000492883 MAPK14Q16539 360 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 NDUFAF6Q330K2 333 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 AP1ARQ63HQ0 302 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 REP15Q6BDI9 236 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 VASNQ6EMK4 673 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ARSKQ6UWY0 536 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 EIF3MQ7L2H7 374 aaKnown RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 PCYOX1LQ8NBM8 494 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 OIT3Q8WWZ8 545 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ANKRD27Q96NW4 1050 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 UGT2B28Q9BY64 529 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 QRSL1Q9H0R6 528 aaKnown RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 TP63Q9H3D4 680 aaPredicted RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 RUBCNLQ9H714 662 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 CACYBPQ9HB71 228 aaKnown RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 SUCOQ9UBS9 1254 aaKnown RBP12.68□□□□□ -0.38
CCM2-217ENST00000492883 VDAC3Q9Y277 283 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 ZNF462Q96JM2 2506 aa12.68□□□□□ -0.38
CCM2-217ENST00000492883 A0A087WZY1 265 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CENPVL1A0A0U1RR11 272 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 AGAP5A6NIR3 686 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 EIF4E2O60573 245 aaKnown RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 UBTFL6P0CB48 400 aaPredicted RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 BMP2P12643 396 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 IL7RP16871 459 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 GPX2P18283 190 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 P2RX1P51575 399 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CCR4P51679 360 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 KCNJ10P78508 379 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 ZNF117Q03924 483 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CRYZQ08257 329 aaKnown RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 CAPRIN1Q14444 709 aaKnown RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 GLYR1Q49A26 553 aaPredicted RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 MTFR2Q6P444 385 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 PEX5LQ8IYB4 626 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 PM20D2Q8IYS1 436 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 TMCO5AQ8N6Q1 288 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 POU5F2Q8N7G0 328 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 OR5M1Q8NGP8 315 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 PMM1Q92871 262 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 MAL2Q969L2 176 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 TMEM19Q96HH6 336 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 PIGQQ9BRB3 760 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CPPED1Q9BRF8 314 aaPredicted RBP12.67□□□□□ -0.38
CCM2-217ENST00000492883 CCDC106Q9BWC9 280 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 GID8Q9NWU2 228 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 SLC35A3Q9Y2D2 325 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 ARL2BPQ9Y2Y0 163 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 MEMO1Q9Y316 297 aa12.67□□□□□ -0.38
CCM2-217ENST00000492883 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms