RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ANP32DO95626 131 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 PEPDP12955 493 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZNF708P17019 499 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 HTR1EP28566 365 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 TIMP3P35625 211 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZNF41P51814 821 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 SUMO3P55854 103 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 CLDN18P56856 261 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 B3GALT5-AS1P59052 145 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 HPCAP84074 193 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 CD226Q15762 336 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZNF141Q15928 474 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 HSPB2Q16082 182 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 AP1ARQ63HQ0 302 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 NSUN5P2Q63ZY6 315 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 BLOC1S3Q6QNY0 202 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 DNAJC14Q6Y2X3 702 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 GATSQ8NAP1 163 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 OR10Q1Q8NGQ4 319 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 B4GALNT2Q8NHY0 566 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 PHOSPHO1Q8TCT1 267 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZPLD1Q8TCW7 415 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZFP90Q8TF47 636 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 XAGE5Q8WWM1 108 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 ZBTB8AQ96BR9 441 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 UCN2Q96RP3 112 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 RABEP2Q9H5N1 569 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 CALHM2Q9HA72 323 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 NPHS2Q9NP85 383 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 LIPT1Q9Y234 373 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 DTNAQ9Y4J8 743 aa9.65□□□□□ -0.86
CDC42SE1-206ENST00000492796 NPIPA5A0A0B4J1W7 369 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 A0A0G2JNJ9 132 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 OR2M5A3KFT3 312 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MBD3L4A6NDZ8 208 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MBD3L3A6NE82 208 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MBD3L5A6NJ08 208 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 NPIPA7E9PJI5 369 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 HMGN4O00479 90 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 HCRTR2O43614 444 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 EIF4E2O60573 245 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 UGT2B17O75795 530 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 GSNP06396 782 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 NPIPA8P0DM63 369 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TROVE2P10155 538 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 POU3F2P20265 443 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 P2RX1P51575 399 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 CASP9P55211 416 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 EEFSECP57772 596 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF117Q03924 483 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 FUT5Q11128 374 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 CDSNQ15517 529 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 GPR68Q15743 365 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TMEM44Q2T9K0 475 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 PLPPR5Q32ZL2 321 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 PDZK1Q5T2W1 519 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TYW3Q6IPR3 259 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ARSKQ6UWY0 536 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ADGRE4PQ86SQ3 457 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF619Q8N2I2 560 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 GTPBP8Q8N3Z3 284 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MEIOBQ8N635 442 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF614Q8N883 585 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TOR1AIP2Q8NFQ8 470 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 LILRB4Q8NHJ6 448 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MBD3L2Q8NHZ7 208 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 GTF2H4Q92759 462 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 RAB8BQ92930 207 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 VPS33AQ96AX1 596 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 ROPN1LQ96C74 230 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 SPDL1Q96EA4 605 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 SH3YL1Q96HL8 342 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TRNT1Q96Q11 434 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 TRIB1Q96RU8 372 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 SAP130Q9H0E3 1048 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 CCDC134Q9H6E4 229 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 MRGBPQ9NV56 204 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 THUMPD1Q9NXG2 353 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 CCDC167Q9P0B6 97 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 STOML1Q9UBI4 398 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 Q9UFV3 132 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 VDAC3Q9Y277 283 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 WDR45Q9Y484 360 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 AP4B1Q9Y6B7 739 aa9.64□□□□□ -0.87
CDC42SE1-206ENST00000492796 A0A096LPI6 279 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 A0A0G2JND7 137 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 SERINC4A6NH21 518 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 CLCA1A8K7I4 914 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 H3BML4 177 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 GTPBP1O00178 669 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 NR5A2O00482 541 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 ZNF264O43296 627 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 GMFGO60234 142 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 FCMRO60667 390 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 IL2RAP01589 272 aa9.63□□□□□ -0.87
CDC42SE1-206ENST00000492796 UBL4AP11441 157 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms