RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 OR4N2Q8NGD1 307 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 OR6K3Q8NGY3 331 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 IFT81Q8WYA0 676 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 HOXB13Q92826 284 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 EFHD2Q96C19 240 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 ELP4Q96EB1 424 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 MARK4Q96L34 752 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 C16orf45Q96MC5 204 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 FAM111AQ96PZ2 611 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 TMEM237Q96Q45 408 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 HBEGFQ99075 208 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 CENPOQ9BU64 300 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 PARD6BQ9BYG5 372 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF395Q9H8N7 513 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-212ENST00000492407 ANKRA2Q9H9E1 313 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 MIEF1Q9NQG6 463 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 PROCRQ9UNN8 238 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
HDAC3-212ENST00000492407 C7orf72A4D263 438 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 B4DXG7 233 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 BIRC5O15392 142 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 SCO2O43819 266 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 TBX19O60806 448 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 TSC22D2O75157 780 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 SOX30O94993 753 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 CTAGE8P0CG41 777 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 PRPH2P23942 346 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GCAP28676 217 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 MAP3K8P41279 467 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 KCNJ5P48544 419 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 SUCLG1P53597 346 aaKnown RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 NR1H2P55055 460 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 ZNF155Q12901 538 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 PON3Q15166 354 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 BEX5Q5H9J7 111 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 SPDYAQ5MJ70 313 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 TCHHL1Q5QJ38 904 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 UBAP2Q5T6F2 1119 aaKnown RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GTF2IRD2BQ6EKJ0 949 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 ZCCHC12Q6PEW1 402 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 RNF165Q6ZSG1 346 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 SH2D5Q6ZV89 423 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GTF2IRD2Q86UP8 949 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 MISPQ8IVT2 679 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 CTAGE4Q8IX94 777 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 CEP70Q8NHQ1 597 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 ACTRT2Q8TDY3 377 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 DUSP19Q8WTR2 217 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 FIG4Q92562 907 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 PIK3IP1Q96FE7 263 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GMPPAQ96IJ6 420 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 AMDHD1Q96NU7 426 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 CCL19Q99731 98 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 CCT7Q99832 543 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 RHOXF2Q9BQY4 288 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 PINK1Q9BXM7 581 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 TBL1XR1Q9BZK7 514 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GLIPR2Q9H4G4 154 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 GSTO2Q9H4Y5 243 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 PAPOLBQ9NRJ5 636 aaKnown RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 DDX18Q9NVP1 670 aaKnown RBP8.21□□□□□ -1.1
HDAC3-212ENST00000492407 KLHL28Q9NXS3 571 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 MED11Q9P086 117 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 NTMQ9P121 344 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 EMC9Q9Y3B6 208 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 AKAP6Q13023 2319 aa8.21□□□□□ -1.1
HDAC3-212ENST00000492407 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 TRIM64A6NGJ6 449 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 TRIM64BA6NI03 449 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 ALG1L2C9J202 215 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 ADAMDEC1O15204 470 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 SIAH2O43255 324 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 IDH3BO43837 385 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 SS18L1O75177 396 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 NKX2-2O95096 273 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 UTS2O95399 124 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 ANGPTL1O95841 491 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 JUNP05412 331 aaKnown RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 PABPC4LP0CB38 370 aaKnown RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 PRPS2P11908 318 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 DDX5P17844 614 aaKnown RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 LOXP28300 417 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 ASMTP46597 345 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 HTR6P50406 440 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 DNAJB13P59910 316 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 BNIP1Q12981 228 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 SLC29A2Q14542 456 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 SGCBQ16585 318 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 IMPG1Q17R60 797 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC3-212ENST00000492407 CFAP157Q5JU67 520 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 PDSS1Q5T2R2 415 aa8.2□□□□□ -1.1
HDAC3-212ENST00000492407 CPTPQ5TA50 214 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms