RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SEMA4FO95754 770 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 GSTM3P21266 225 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 TBXA2RP21731 343 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SLC9A3P48764 834 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 RORCP51449 518 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 EEF1A1P68104 462 aaKnown RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 PSPHP78330 225 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 ADAM15Q13444 863 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 KIR2DS3Q14952 304 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 OR1Q1Q15612 314 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 MINDY4Q4G0A6 757 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 FAM131AQ6UXB0 335 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 GLCCI1Q86VQ1 547 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 TMEM99Q8N816 258 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 NT5CQ8TCD5 201 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SPRYD4Q8WW59 207 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 DNAJA3Q96EY1 480 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 CCDC3Q9BQI4 270 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 MMP28Q9H239 520 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 CCDC86Q9H6F5 360 aaKnown RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 PLEKHB1Q9UF11 243 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SAGE2PA6NJ88 616 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 TGFBR3LH3BV60 316 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 ASNA1O43681 348 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 CSF2P04141 144 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SMIM10L1P0DMW3 83 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SAGP10523 405 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SDHBP21912 280 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 TLX1P31314 330 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 MAZP56270 477 aaKnown RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 RPS7P62081 194 aaKnown RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 RUNX1T1Q06455 604 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 DUSP8Q13202 625 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 PDZK1Q5T2W1 519 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 TMEM184AQ6ZMB5 413 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 OR51L1Q8NGJ5 315 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 CNOT9Q92600 299 aaKnown RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 SMIM10Q96HG1 83 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 KATNB1Q9BVA0 655 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 OR51V1Q9H2C8 321 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 UBQLN3Q9H347 655 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 PHF11Q9UIL8 331 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 THADAQ6YHU6 1953 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 A0A1B0GVC2 190 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 A6NIN4 97 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 IGHV4-34P06331 123 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CPEP16870 476 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 ENDOUP21128 410 aaKnown RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 FPR3P25089 353 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 EMDP50402 254 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 RAB40BQ12829 278 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 C3orf38Q5JPI3 329 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 AADACL4Q5VUY2 407 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 MBOAT2Q6ZWT7 520 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 ABHD13Q7L211 337 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 OR52R1Q8NGF1 315 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 SLC22A18Q96BI1 424 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 DIRAS2Q96HU8 199 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CBLCQ9ULV8 474 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 SF3B6Q9Y3B4 125 aaKnown RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CYR61O00622 381 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 NDUFS1P28331 727 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 ARHGAP11BQ3KRB8 267 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 FHL5Q5TD97 284 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 VASNQ6EMK4 673 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 IL20RBQ6UXL0 311 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 RPTNQ6XPR3 784 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 PARGQ86W56 976 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CA13Q8N1Q1 262 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 RFLNBQ8N5W9 214 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CAMKVQ8NCB2 501 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 UFD1Q92890 307 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 SLC25A46Q96AG3 418 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 TOE1Q96GM8 510 aaKnown RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 PEX11GQ96HA9 241 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 RIPOR3Q96MK2 946 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 LMF1Q96S06 567 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF350Q9GZX5 532 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-220ENST00000492280 IL20Q9NYY1 176 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 NLGN3Q9NZ94 848 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CALML5Q9NZT1 146 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 A3GALT2U3KPV4 340 aa11.55□□□□□ -0.56
HMGN1-220ENST00000492280 CELSR3Q9NYQ7 3312 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 DUXAA6NLW8 204 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 C12orf71A8MTZ7 269 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 KDM4EB2RXH2 506 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IMPA2O14732 288 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 CASKO14936 926 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 KLF4O43474 513 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 GMFGO60234 142 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 KCNJ13O60928 360 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 SERPINI2O75830 405 aa11.54□□□□□ -0.56
HMGN1-220ENST00000492280 IL7P13232 177 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms