RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SUCLG1P53597 346 aaKnown RBP22.28■■□□□ 1.16
UPF3A-209ENST00000492270 ANXA8L1Q5VT79 327 aa22.28■■□□□ 1.16
UPF3A-209ENST00000492270 PIWIL2Q8TC59 973 aaKnown RBP22.28■■□□□ 1.16
UPF3A-209ENST00000492270 SMPDL3BQ92485 455 aa22.28■■□□□ 1.16
UPF3A-209ENST00000492270 OR52B2Q96RD2 323 aa22.28■■□□□ 1.16
UPF3A-209ENST00000492270 UCN2Q96RP3 112 aa22.28■■□□□ 1.16
UPF3A-209ENST00000492270 PIGQQ9BRB3 760 aa22.28■■□□□ 1.16
UPF3A-209ENST00000492270 ZNF629Q9UEG4 869 aaPredicted RBP22.28■■□□□ 1.16
UPF3A-209ENST00000492270 CSMD2Q7Z408 3487 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 SEC14L5O43304 696 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 HCRTR2O43614 444 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 TGM6O95932 706 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 TMIGD3P0DMS9 266 aaPredicted RBP22.27■■□□□ 1.16
UPF3A-209ENST00000492270 H2AFXP16104 143 aaPredicted RBP22.27■■□□□ 1.16
UPF3A-209ENST00000492270 UQCRC2P22695 453 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 CTSSP25774 331 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 CLDN20P56880 219 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 ZNF117Q03924 483 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 BCL2A1Q16548 175 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 TMEM44Q2T9K0 475 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 GLYR1Q49A26 553 aaPredicted RBP22.27■■□□□ 1.16
UPF3A-209ENST00000492270 FLYWCH1Q4VC44 716 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 GCNT2Q8N0V5 402 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 VPS37AQ8NEZ2 397 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 SDF2Q99470 211 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 SH3GL2Q99962 352 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 OR51I1Q9H343 314 aa22.27■■□□□ 1.16
UPF3A-209ENST00000492270 NPIPB9F8W1W9 429 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 ASCL1P50553 236 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 KRTAP10-9P60411 292 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 KLHL26Q53HC5 615 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 GRAMD2AQ8IUY3 354 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 MISPQ8IVT2 679 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 MEIOBQ8N635 442 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 PHOSPHO1Q8TCT1 267 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 WNT2BQ93097 391 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 INTS12Q96CB8 462 aaKnown RBP22.26■■□□□ 1.15
UPF3A-209ENST00000492270 CCDC115Q96NT0 180 aa22.26■■□□□ 1.15
UPF3A-209ENST00000492270 TNFRSF21O75509 655 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 SSTR2P30874 369 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 UQCRC1P31930 480 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 ATP12AP54707 1039 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 TLE4Q04727 773 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 PLPPR5Q32ZL2 321 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 NDUFAF6Q330K2 333 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 SAXO2Q658L1 398 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 TNFAIP8L2Q6P589 184 aaPredicted RBP22.25■■□□□ 1.15
UPF3A-209ENST00000492270 CBLN3Q6UW01 205 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 HDXQ7Z353 690 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF614Q8N883 585 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 CHDHQ8NE62 594 aaPredicted RBP22.25■■□□□ 1.15
UPF3A-209ENST00000492270 B4GALNT2Q8NHY0 566 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 MIPOL1Q8TD10 442 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 ACTRT2Q8TDY3 377 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 RAB8BQ92930 207 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 C14orf79Q96F83 325 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 TM9SF2Q99805 663 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 SLC35A5Q9BS91 424 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 INPP5KQ9BT40 448 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 SLCO1B3Q9NPD5 702 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 MED17Q9NVC6 651 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 BTNL2Q9UIR0 455 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 USH1CQ9Y6N9 552 aa22.25■■□□□ 1.15
UPF3A-209ENST00000492270 CENPVL1A0A0U1RR11 272 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 LINC01387J3KSC0 135 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 SOX30O94993 753 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 RCBTB2O95199 551 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 PGRP06401 933 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 OR12D1P0DN82 309 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 CDKN2CP42773 168 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF41P51814 821 aaPredicted RBP22.24■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF527Q8NB42 609 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 GOT1L1Q8NHS2 421 aaPredicted RBP22.24■■□□□ 1.15
UPF3A-209ENST00000492270 FIG4Q92562 907 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 NEURL3Q96EH8 262 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF845Q96IR2 970 aaPredicted RBP22.24■■□□□ 1.15
UPF3A-209ENST00000492270 LURAP1Q96LR2 239 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 OR52E6Q96RD3 313 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 PINK1Q9BXM7 581 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 HOXD1Q9GZZ0 328 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 HHATLQ9HCP6 504 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 ARGLU1Q9NWB6 273 aaPredicted RBP22.24■■□□□ 1.15
UPF3A-209ENST00000492270 KCNE5Q9UJ90 142 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 CARD8Q9Y2G2 431 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 L3MBTL1Q9Y468 752 aa22.24■■□□□ 1.15
UPF3A-209ENST00000492270 A0A087WZY1 265 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 DUXAA6NLW8 204 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 EEF1E1-BLOC1S5C9J1V9 151 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 EEF1E1O43324 174 aaKnown RBP22.23■■□□□ 1.15
UPF3A-209ENST00000492270 FCMRO60667 390 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 DIAPH2O60879 1101 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 IDO1P14902 403 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 ZNF17P17021 662 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 OPRM1P35372 400 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 FUT5Q11128 374 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 GPR68Q15743 365 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 ARHGAP11BQ3KRB8 267 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 PDCD4Q53EL6 469 aaKnown RBP22.23■■□□□ 1.15
UPF3A-209ENST00000492270 PDZK1Q5T2W1 519 aa22.23■■□□□ 1.15
UPF3A-209ENST00000492270 CHMP1BQ7LBR1 199 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms