RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LIN28AQ9H9Z2 209 aaKnown RBP2.84□□□□□ -1.95
CD46-216ENST00000490278 SPRR3Q9UBC9 169 aa2.84□□□□□ -1.95
CD46-216ENST00000490278 ANAPC7Q9UJX3 599 aa2.84□□□□□ -1.95
CD46-216ENST00000490278 CA5BQ9Y2D0 317 aa2.84□□□□□ -1.95
CD46-216ENST00000490278 SPACA6W5XKT8 324 aa2.84□□□□□ -1.95
CD46-216ENST00000490278 ANKRD30BQ9BXX2 1392 aa2.84□□□□□ -1.96
CD46-216ENST00000490278 PPIAL4CA0A0B4J2A2 164 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 ESYT2A0FGR8 921 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 DHRS7CA6NNS2 312 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 A8MU10 97 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 K7ENP7 123 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 K7EPI3 171 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 WWP2O00308 870 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 MAPK13O15264 365 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 STX7O15400 261 aaKnown RBP2.83□□□□□ -1.96
CD46-216ENST00000490278 EFNA2O43921 213 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 SMPD2O60906 423 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 ZNF254O75437 659 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 MFN2O95140 757 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 CCDC166P0CW27 439 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 PPIAL4GP0DN37 164 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 BDKRB1P46663 353 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 LIM2P55344 173 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 NUCB2P80303 420 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
CD46-216ENST00000490278 DPY19L4Q7Z388 723 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 SH2D6Q7Z4S9 175 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 TMEM17Q86X19 198 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 NANPQ8TBE9 248 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 UBE2Q2Q8WVN8 375 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 TBC1D31Q96DN5 1066 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 SLC25A38Q96DW6 304 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 THUMPD2Q9BTF0 503 aaKnown RBP2.83□□□□□ -1.96
CD46-216ENST00000490278 PPDPFQ9H3Y8 114 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 CAB39LQ9H9S4 337 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 CALHM2Q9HA72 323 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 SMC3Q9UQE7 1217 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 PPIAL4AQ9Y536 164 aa2.83□□□□□ -1.96
CD46-216ENST00000490278 GSAPA4D1B5 854 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 EPOPA6NHQ4 379 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 CTAGE5O15320 804 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 GPX5O75715 221 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 IGF1P05019 195 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 STSP08842 583 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 ZBTB25P24278 435 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 ADORA2BP29275 332 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 RPL29P47914 159 aaKnown RBP2.82□□□□□ -1.96
CD46-216ENST00000490278 ACADVLP49748 655 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 LYZP61626 148 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 MRPS11P82912 194 aaKnown RBP2.82□□□□□ -1.96
CD46-216ENST00000490278 NDPQ00604 133 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 OC90Q02509 493 aaPredicted RBP2.82□□□□□ -1.96
CD46-216ENST00000490278 ST3GAL3Q11203 375 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 NDUFA9Q16795 377 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 OR2B11Q5JQS5 317 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 RIPPLY2Q5TAB7 128 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 TFAP2EQ6VUC0 442 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 OR10T2Q8NGX3 314 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 MYLPFQ96A32 169 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 MAGEB18Q96M61 343 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 Q9H3A6 140 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 TMEM9Q9P0T7 183 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 USP16Q9Y5T5 823 aa2.82□□□□□ -1.96
CD46-216ENST00000490278 ZFP92A6NM28 416 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 B4DXG7 233 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 B3GAT3O94766 335 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 LYPD3O95274 346 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 IGHV3-23P01764 117 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 HSPB1P04792 205 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 PTMAP06454 111 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 HEXBP07686 556 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 ASNSP08243 561 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 PSMB1P20618 241 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 SERPINA2P20848 420 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 OR3A4PP47883 348 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 STARP49675 285 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 SLC26A2P50443 739 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 EFNA3P52797 238 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 RIPPLY3P57055 190 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 BCL2L1Q07817 233 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 RIPPLY1Q0D2K3 151 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 CCDC57Q2TAC2 916 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 SULT1C3Q6IMI6 304 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 CXCL17Q6UXB2 119 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 APTXQ7Z2E3 356 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 TRPM8Q7Z2W7 1104 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 GRAMD2AQ8IUY3 354 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 PRR22Q8IZ63 422 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 AENQ8WTP8 325 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 B3GALT6Q96L58 329 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 NOL4LQ96MY1 436 aaPredicted RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 OR5B2Q96R09 309 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 CRNKL1Q9BZJ0 848 aaKnown RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 SLC35D1Q9NTN3 355 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 PAK1IP1Q9NWT1 392 aaPredicted RBP2.81□□□□□ -1.96
CD46-216ENST00000490278 OR1A1Q9P1Q5 309 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 XPO7Q9UIA9 1087 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms