RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 UQCRC1P31930 480 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 XKP51811 444 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 NEK2P51955 445 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 RAP1GDS1P52306 607 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 NAGLUP54802 743 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 PLTPP55058 493 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 SORDQ00796 357 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 CALCOCO2Q13137 446 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 SNTA1Q13424 505 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 DDX39BQ13838 428 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 GTF2H2Q13888 395 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 RAB39AQ14964 217 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 SF3B4Q15427 424 aaKnown RBP eCLIP5.77□□□□□ -1.491e-6■□□□□ 9.8
PRPF40A-210ENST00000489741 PFKFB4Q16877 469 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 FAM83EQ2M2I3 478 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 C3orf36Q3SXR2 165 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 EIPR1Q53HC9 387 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 DCST1Q5T197 706 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 GTF2H2CQ6P1K8 395 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 PAMR1Q6UXH9 720 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 RAPH1Q70E73 1250 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 GOLGA7Q7Z5G4 137 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 TBC1D1Q86TI0 1168 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 CTAGE3PQ8IX95 158 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 METTL4Q8N3J2 472 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 LIX1Q8N485 282 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 C9orf106Q8NAJ2 232 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 OR4K14Q8NGD5 310 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 TRPC4APQ8TEL6 797 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 RNF138Q8WVD3 245 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 EXT2Q93063 718 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 HGDQ93099 445 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 ABTB1Q969K4 478 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 CTHRC1Q96CG8 243 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 REPS1Q96D71 796 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 RMND5BQ96G75 393 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 JSRP1Q96MG2 331 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 GAL3ST4Q96RP7 486 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 CENPKQ9BS16 269 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 NXF5Q9H1B4 397 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 DPH5Q9H2P9 285 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 ACTR8Q9H981 624 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 ZBTB26Q9HCK0 441 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 TEX10Q9NXF1 929 aaPredicted RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 MTRF1LQ9UGC7 380 aaKnown RBP5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 DTX4Q9Y2E6 619 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 PLEKHA6Q9Y2H5 1048 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 SLC6A5Q9Y345 797 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 MPDZO75970 2070 aa5.77□□□□□ -1.49
PRPF40A-210ENST00000489741 FN1P02751 2386 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 A0A1W2PPR1 153 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TUBAL3A6NHL2 446 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TO15178 435 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 ICOSLGO75144 302 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TRAPPC6AO75865 159 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 RCBTB2O95199 551 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 CLDN9O95484 217 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 ACTL6AO96019 429 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 GBAP04062 536 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 ALDOAP04075 364 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 HRGP04196 525 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 ATP1B1P05026 303 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 KLK1P06870 262 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 RHOXF2BP0C7M4 288 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 CPMP14384 443 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 PORP16435 677 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 CD53P19397 219 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 GPX3P22352 226 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 PIK3R1P27986 724 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 STX2P32856 288 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 OPRM1P35372 400 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 MAGEA12P43365 314 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 SLCO1A2P46721 670 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 PIK3CGP48736 1102 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 PCYT1AP49585 367 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TMED10P49755 219 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 EMDP50402 254 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 AGFG1P52594 562 aaKnown RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 CAV1Q03135 178 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 SLMAPQ14BN4 828 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 DEFB113Q30KQ7 82 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TECRLQ5HYJ1 363 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 C10orf62Q5T681 223 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 FRG2Q64ET8 278 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 OR52E8Q6IFG1 317 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 CYP20A1Q6UW02 462 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 NUP54Q7Z3B4 507 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 NUDT13Q86X67 352 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 MMP21Q8N119 569 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 WDSUB1Q8N9V3 476 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 SIMC1Q8NDZ2 872 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 FAM83FQ8NEG4 500 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 OR52B6Q8NGF0 335 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 GOT1L1Q8NHS2 421 aaPredicted RBP5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 LINC01560Q8TB33 94 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 TM4SF18Q96CE8 201 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 HSPBAP1Q96EW2 488 aa5.76□□□□□ -1.49
PRPF40A-210ENST00000489741 LRRC46Q96FV0 321 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms