RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 GCNT6Q5T4J0 391 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 FNDC7Q5VTL7 733 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 TYW3Q6IPR3 259 aaKnown RBP11.34□□□□□ -0.59
COL4A5-206ENST00000489230 NANOGP8Q6NSW7 305 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 EIF3MQ7L2H7 374 aaKnown RBP11.34□□□□□ -0.59
COL4A5-206ENST00000489230 ARPINQ7Z6K5 226 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SERPINA11Q86U17 422 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 MSRB3Q8IXL7 192 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 CMIPQ8IY22 773 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 EID3Q8N140 333 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 PHOSPHO1Q8TCT1 267 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SLC38A5Q8WUX1 472 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SARAFQ96BY9 339 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 AURKBQ96GD4 344 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-206ENST00000489230 ECSITQ9BQ95 431 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SPATA5L1Q9BVQ7 753 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 UBQLN3Q9H347 655 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 EXO5Q9H790 373 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 ZNF703Q9H7S9 590 aaPredicted RBP11.34□□□□□ -0.59
COL4A5-206ENST00000489230 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 SLC35A3Q9Y2D2 325 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 IFT52Q9Y366 437 aa11.34□□□□□ -0.59
COL4A5-206ENST00000489230 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 AGAP5A6NIR3 686 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 LRRC3CA6NJW4 275 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 AQP7O14520 342 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 AIM2O14862 343 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 BCKDKO14874 412 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 KIAA0513O60268 411 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 SERPINB7O75635 380 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 UGT2B17O75795 530 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 PDE9AO76083 593 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 CD1EP15812 388 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 IL7RP16871 459 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 DPP4P27487 766 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 PTGS2P35354 604 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 CHRNEQ04844 493 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 LARS2Q15031 903 aaKnown RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 REP15Q6BDI9 236 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 OR5M10Q6IEU7 315 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 APOOLQ6UXV4 268 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 HACD2Q6Y1H2 254 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 TRILQ7L0X0 811 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 ZAR1Q86SH2 424 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 GALNT10Q86SR1 603 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 KRT73Q86Y46 540 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 ANKFN1Q8N957 763 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 FADS6Q8N9I5 356 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 BHLHE22Q8NFJ8 381 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 TOR1AIP2Q8NFQ8 470 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF607Q96SK3 696 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 CPPED1Q9BRF8 314 aaPredicted RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 LAT2Q9GZY6 243 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 DSN1Q9H410 356 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 KAT8Q9H7Z6 458 aaKnown RBP11.33□□□□□ -0.6
COL4A5-206ENST00000489230 TAS2R10Q9NYW0 307 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 FLRT3Q9NZU0 649 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 MED11Q9P086 117 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
COL4A5-206ENST00000489230 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-206ENST00000489230 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 PRRG2O14669 202 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF264O43296 627 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 HCRTR2O43614 444 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 ACTL6AO96019 429 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-206ENST00000489230 ETS2P15036 469 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 EIF1P41567 113 aaKnown RBP11.32□□□□□ -0.6
COL4A5-206ENST00000489230 P2RX1P51575 399 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-206ENST00000489230 KCNJ10P78508 379 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 CDK6Q00534 326 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 CYP51A1Q16850 503 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 NHSL2Q5HYW2 709 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 FAM91A1Q658Y4 838 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 FRRS1Q6ZNA5 592 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 C11orf65Q8NCR3 313 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 OR2M3Q8NG83 312 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 OR14L1PQ8NHC6 308 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 NEIL3Q8TAT5 605 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 RCN3Q96D15 328 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 PIGQQ9BRB3 760 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
COL4A5-206ENST00000489230 TSPAN10Q9H1Z9 355 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-206ENST00000489230 SLC38A1Q9H2H9 487 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms