RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 NOP53Q9NZM5 478 aaKnown RBP11.3□□□□□ -0.6
SRRM1-216ENST00000489130 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
SRRM1-216ENST00000489130 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
SRRM1-216ENST00000489130 VDAC3Q9Y277 283 aa11.3□□□□□ -0.6
SRRM1-216ENST00000489130 ACTL7BQ9Y614 415 aa11.3□□□□□ -0.6
SRRM1-216ENST00000489130 F8P00451 2351 aa11.3□□□□□ -0.6
SRRM1-216ENST00000489130 CPOXP36551 454 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-216ENST00000489130 CLDN8P56748 225 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 HBA1P69905 142 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 TP53BP2Q13625 1128 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 FGFBP1Q14512 234 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 PON3Q15166 354 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 GUSBP1Q15486 140 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 PDCD2Q16342 344 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-216ENST00000489130 SPDYE7PQ495Y7 208 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 CNEP1R1Q8N9A8 125 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 ADAMTS15Q8TE58 950 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 SMPDL3BQ92485 455 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 ADGRG7Q96K78 797 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 FOXC2Q99958 501 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 LIME1Q9H400 295 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 AKTIPQ9H8T0 292 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 MED17Q9NVC6 651 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 STOML1Q9UBI4 398 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-216ENST00000489130 RAP2CQ9Y3L5 183 aa11.29□□□□□ -0.6
SRRM1-216ENST00000489130 SH3D21A4FU49 640 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 ADAMDEC1O15204 470 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CGAP01215 116 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 HRGP04196 525 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 TUBBP07437 444 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CD8BP10966 210 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 FCGR2AP12318 317 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 SLC1A6P48664 564 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 ZNF41P51814 821 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 RAC1P63000 192 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 MPP2Q14168 576 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CTU2Q2VPK5 515 aaKnown RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 KLHL26Q53HC5 615 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 DCST2Q5T1A1 773 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 BHLHB9Q6PI77 547 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 BTLAQ7Z6A9 289 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 MTERF4Q7Z6M4 381 aaKnown RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CROCCP2Q86T23 111 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 LRRC34Q8IZ02 419 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 KIRREL3Q8IZU9 778 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 ZNF527Q8NB42 609 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 OR8J2Q8NGG1 315 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 OR10D3Q8NH80 312 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 B4GALNT2Q8NHY0 566 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 PGM2Q96G03 612 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 SH3YL1Q96HL8 342 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 PPP1R36Q96LQ0 422 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 SORT1Q99523 831 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 NPAS1Q99742 590 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 HOXD1Q9GZZ0 328 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 CCM2LQ9NUG4 571 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 PAQR5Q9NXK6 330 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-216ENST00000489130 EDARQ9UNE0 448 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
SRRM1-216ENST00000489130 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.6
SRRM1-216ENST00000489130 NPIPB9F8W1W9 429 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 RNASET2O00584 256 aaKnown RBP11.27□□□□□ -0.61
SRRM1-216ENST00000489130 EIF1AYO14602 144 aaKnown RBP11.27□□□□□ -0.61
SRRM1-216ENST00000489130 CFLARO15519 480 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 AQP8O94778 261 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 LINGO3P0C6S8 592 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 CCKARP32238 428 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 CD79BP40259 229 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
SRRM1-216ENST00000489130 SIRPAP78324 504 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 ZNF117Q03924 483 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 SGCBQ16585 318 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 PGS1Q32NB8 556 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
SRRM1-216ENST00000489130 FBXW10Q5XX13 1052 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 OR4F3Q6IEY1 312 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 PAMR1Q6UXH9 720 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 CLECL1Q8IZS7 167 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 OR5D16Q8NGK9 328 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 OR5AK3PQ8NH89 298 aa11.27□□□□□ -0.61
SRRM1-216ENST00000489130 POC1BQ8TC44 478 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms