RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 E9PBE3 544 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 GOLGA8NF8WBI6 632 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 SYT5O00445 386 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 RNASET2O00584 256 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ZIC3O60481 467 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 CYP7B1O75881 506 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 RCBTB2O95199 551 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ANP32DO95626 131 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 IGKV1D-16P01601 117 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 CRHP06850 196 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 PABPC4LP0CB38 370 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF17P17021 662 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 MATN1P21941 496 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 UQCRC2P22695 453 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 KHKP50053 298 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF136P52737 540 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 CTBP2P56545 445 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 CLDN18P56856 261 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 C21orf58P58505 322 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 RPS26P62854 115 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 HBA1P69905 142 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 SIRPAP78324 504 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 OCRLQ01968 901 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 MPP2Q14168 576 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 FAM174BQ3ZCQ3 159 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 SEM1Q6ZVN7 128 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 C6orf120Q7Z4R8 191 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 MTERF4Q7Z6M4 381 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ANKRD46Q86W74 232 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 RIMKLAQ8IXN7 391 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 NAXEQ8NCW5 288 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 TOR1AIP2Q8NFQ8 470 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 OR4C3Q8NH37 302 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 PSMA8Q8TAA3 256 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 LRRC8CQ8TDW0 803 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ACTRT2Q8TDY3 377 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 FAM222BQ8WU58 562 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 OR7D2Q96RA2 312 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 SORT1Q99523 831 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 SLC39A3Q9BRY0 314 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 POLDIP3Q9BY77 421 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 MANSC1Q9H8J5 431 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 MEAF6Q9HAF1 191 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 PAQR5Q9NXK6 330 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 DNAJB12Q9NXW2 375 aaKnown RBP8.25□□□□□ -1.09
HDAC6-232ENST00000489053 NDRG3Q9UGV2 375 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF337Q9Y3M9 751 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF175Q9Y473 711 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 CACNA1CQ13936 2221 aa8.25□□□□□ -1.09
HDAC6-232ENST00000489053 IGLV3-32A0A0A0MS00 114 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 A0A1W2PQD3 144 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 TMEM247A6NEH6 219 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 C17orf51A8MQB3 221 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 KDM4EB2RXH2 506 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 DIAPH2O60879 1101 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 STX11O75558 287 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 UBL4AP11441 157 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 IDO1P14902 403 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 IGFBP2P18065 325 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 EPHA3P29320 983 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 SLC7A1P30825 629 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 RNF144AP50876 292 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 SLC18A1P54219 525 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 ATP12AP54707 1039 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CLDN15P56746 228 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 STX1BP61266 288 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 SORDQ00796 357 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 SNTB1Q13884 538 aaKnown RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GNA13Q14344 377 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CASP8Q14790 479 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 PON3Q15166 354 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GPR68Q15743 365 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GPAT3Q53EU6 434 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 BEND6Q5SZJ8 279 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GTF2IRD2BQ6EKJ0 949 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CAMKMTQ7Z624 323 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GTF2IRD2Q86UP8 949 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 STK32CQ86UX6 486 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CLECL1Q8IZS7 167 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 GTPBP8Q8N3Z3 284 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 RELL2Q8NC24 303 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 OR8J2Q8NGG1 315 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 OR5D16Q8NGK9 328 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 RNF138Q8WVD3 245 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 XAGE5Q8WWM1 108 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 TESCQ96BS2 214 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 NTNG2Q96CW9 530 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF845Q96IR2 970 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 RNF145Q96MT1 663 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 OR52E6Q96RD3 313 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 PANX1Q96RD7 426 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 SLC35A5Q9BS91 424 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 TMEM185BQ9H7F4 350 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 TMBIM4Q9HC24 238 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 MED17Q9NVC6 651 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CRIM1Q9NZV1 1036 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 PROCRQ9UNN8 238 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 L3MBTL1Q9Y468 752 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms