RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-213	ENST00000489003	HNRNPCL3	B7ZW38	293 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003		H3BNH8	94 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	FXYD1	O00168	92 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	GTPBP1	O00178	669 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	AQP7	O14520	342 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	HNRNPCL1	O60812	293 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	HNRNPCL4	P0DMR1	293 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	ARAF	P10398	606 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	ENDOU	P21128	410 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	MSX1	P28360	303 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	PTGS2	P35354	604 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	DSCR4	P56555	118 aa	Predicted RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	MTPN	P58546	118 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	HPCA	P84074	193 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	RBPJ	Q06330	500 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	ADRM1	Q16186	407 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	GCNT6	Q5T4J0	391 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	CBLN3	Q6UW01	205 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003		Q6ZPB1	254 aa	Predicted RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	MISP	Q8IVT2	679 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	ZNF614	Q8N883	585 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	B4GALNT2	Q8NHY0	566 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	NEIL3	Q8TAT5	605 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	MED12	Q93074	2177 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	RCN3	Q96D15	328 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	C1GALT1C1	Q96EU7	318 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	TMEM19	Q96HH6	336 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	KLHDC3	Q9BQ90	382 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	EXO5	Q9H790	373 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	KAT8	Q9H7Z6	458 aa	Known RBP	13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	PTGES2	Q9H7Z7	377 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	EFCAB1	Q9HAE3	211 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	HHATL	Q9HCP6	504 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	BCL2L10	Q9HD36	194 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	A4GALT	Q9NPC4	353 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	SPRR3	Q9UBC9	169 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	CARD8	Q9Y2G2	431 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	SLC6A5	Q9Y345	797 aa		13.77	□□□□□ -0.21
FDPS-213	ENST00000489003	MYO7B	Q6PIF6	2116 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	AGAP5	A6NIR3	686 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	NPIPA2	E9PIF3	369 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	NPIPA3	F8WFD2	350 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	AIM2	O14862	343 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	GMFG	O60234	142 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	BCHE	P06276	602 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	STS	P08842	583 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	HK1	P19367	917 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	GZMM	P51124	257 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	CRISP3	P54108	245 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	KCNJ10	P78508	379 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	KCNC4	Q03721	635 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	ZNF117	Q03924	483 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	FGFBP1	Q14512	234 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	ZNF630	Q2M218	657 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	NDUFAF6	Q330K2	333 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	GXYLT1	Q4G148	440 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	DOLPP1	Q86YN1	238 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	METTL25	Q8N6Q8	603 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	OR14L1P	Q8NHC6	308 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	FAM57A	Q8TBR7	257 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	OIT3	Q8WWZ8	545 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	CMTM5	Q96DZ9	223 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	LRRC37B	Q96QE4	947 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	TREX2	Q9BQ50	279 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	LAT2	Q9GZY6	243 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	GID8	Q9NWU2	228 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	TAS2R10	Q9NYW0	307 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	CALML5	Q9NZT1	146 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	TNFRSF10D	Q9UBN6	386 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	SUCO	Q9UBS9	1254 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	DKKL1	Q9UK85	242 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	ICAM5	Q9UMF0	924 aa		13.76	□□□□□ -0.21
FDPS-213	ENST00000489003	DSPP	Q9NZW4	1301 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	OR14I1	A6ND48	311 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	TMEM247	A6NEH6	219 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	CLDN24	A6NM45	220 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	ZNF264	O43296	627 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	HCRTR2	O43614	444 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	EIF4E2	O60573	245 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	SLC19A2	O60779	497 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	BCAS1	O75363	584 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	DCTN3	O75935	186 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	PGM3	O95394	542 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	DBI	P07108	87 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	ABO	P16442	354 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	BMP7	P18075	431 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	PRDX6	P30041	224 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	PGM1	P36871	562 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	P2RX1	P51575	399 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	B3GALT5-AS1	P59052	145 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	CDK6	Q00534	326 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	1e-8	■■■■□ 20.8
FDPS-213	ENST00000489003	GNA13	Q14344	377 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	C3AR1	Q16581	482 aa		13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.75	□□□□□ -0.21
FDPS-213	ENST00000489003	GLYR1	Q49A26	553 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms