RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 UBQLNLQ8IYU4 475 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 CENPLQ8N0S6 344 aaPredicted RBP2.35□□□□□ -2.03
CD46-215ENST00000488596 CEND1Q8N111 149 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 OR13F1Q8NGS4 319 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 NANPQ8TBE9 248 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 BADQ92934 168 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 SDSLQ96GA7 329 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 TMEM80Q96HE8 168 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 AKR1E2Q96JD6 320 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 CNOT6LQ96LI5 555 aaKnown RBP2.35□□□□□ -2.03
CD46-215ENST00000488596 MAPKAP1Q9BPZ7 522 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 CAB39LQ9H9S4 337 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 POLD4Q9HCU8 107 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 SLC35D1Q9NTN3 355 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 VNN3Q9NY84 501 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 TMOD2Q9NZR1 351 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 IL17CQ9P0M4 197 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 KLHL21Q9UJP4 597 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 LAMP5Q9UJQ1 280 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 ANAPC7Q9UJX3 599 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 SMC3Q9UQE7 1217 aa2.35□□□□□ -2.03
CD46-215ENST00000488596 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 ATP10DQ9P241 1426 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 CROCCQ5TZA2 2017 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 OR6C65A6NJZ3 312 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 H3BMQ9 156 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 OR7A17O14581 309 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TNFSF11O14788 317 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 HAT1O14929 419 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 MAPK13O15264 365 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 OR1F1O43749 312 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 PEX11AO75192 247 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 GPX5O75715 221 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 NEBLO76041 1014 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TM7SF2O76062 418 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 GUCA1CO95843 209 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 F10P00742 488 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 CD55P08174 381 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 ASNSP08243 561 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TSPY4P0CV99 314 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TSPY10P0CW01 314 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 EPB41P11171 864 aaKnown RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 BCKDHAP12694 445 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 DESP17661 470 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 ADORA2BP29275 332 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 STARP49675 285 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 P2RY4P51582 365 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 RND3P61587 244 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 MRPS11P82912 194 aaKnown RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 BDH1Q02338 343 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 BCL2L1Q07817 233 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 PJVKQ0ZLH3 352 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 ATXN7L3Q14CW9 347 aaPredicted RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 SBK1Q52WX2 424 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TMEM41BQ5BJD5 291 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 WSCD1Q658N2 575 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 BLOC1S2Q6QNY1 142 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 TRPM8Q7Z2W7 1104 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 ANKRD37Q7Z713 158 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 KIAA1328Q86T90 577 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 SERPINA9Q86WD7 417 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 CADM2Q8N3J6 435 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 FADS6Q8N9I5 356 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 FAF2Q96CS3 445 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 HAVCR1Q96D42 359 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 VPS39Q96JC1 886 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 KIR2DL4Q99706 377 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 FEM1AQ9BSK4 669 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 YTHDF1Q9BYJ9 559 aaKnown RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 MEAF6Q9HAF1 191 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 MRPL39Q9NYK5 338 aaKnown RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 GALPQ9UBC7 116 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 APOBEC3BQ9UH17 382 aaKnown RBP2.34□□□□□ -2.03
CD46-215ENST00000488596 CYTH4Q9UIA0 394 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 SH3BGRL2Q9UJC5 107 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 CA5BQ9Y2D0 317 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 USP16Q9Y5T5 823 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 AP1M2Q9Y6Q5 423 aa2.34□□□□□ -2.03
CD46-215ENST00000488596 PRRC2AP48634 2157 aaKnown RBP2.33□□□□□ -2.04
CD46-215ENST00000488596 E7ENQ6 273 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 UFL1O94874 794 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 LY6G6DO95868 133 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 OPN1LWP04000 364 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 KRT6BP04259 564 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 PCCBP05166 539 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 CD1EP15812 388 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 VDAC1P21796 283 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 DRD5P21918 477 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 PAX7P23759 505 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 ADSSP30520 456 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 UGT1A3P35503 534 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 RPL29P47914 159 aaKnown RBP2.33□□□□□ -2.04
CD46-215ENST00000488596 KRT6CP48668 564 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 DIO3P55073 304 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 EWSR1Q01844 656 aaKnown RBP eCLIP2.33□□□□□ -2.04
CD46-215ENST00000488596 ISXQ2M1V0 245 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 TIGITQ495A1 244 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 PAGE2BQ5JRK9 111 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 OLFML2AQ68BL7 652 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 PVRIGQ6DKI7 326 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms