RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ELP6Q0PNE2 266 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ORC2Q13416 577 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 EXOSC2Q13868 293 aaKnown RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 SPA17Q15506 151 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF699Q32M78 642 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ANKDD1AQ495B1 522 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ACSF3Q4G176 576 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 HSP90AA4PQ58FG1 418 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ABRAXAS1Q6UWZ7 409 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ARMCX2Q7L311 632 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 LPCAT2Q7L5N7 544 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 NUFIP2Q7Z417 695 aaKnown RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 CARM1Q86X55 608 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 FAM131BQ86XD5 332 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 CATSPER3Q86XQ3 398 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 RNF130Q86XS8 419 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 GCNT2Q8N0V5 402 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 RNF10Q8N5U6 811 aaKnown RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ARFGAP2Q8N6H7 521 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 Q8NBF4 154 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF540Q8NDQ6 660 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 OR52J3Q8NH60 311 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 ESR2Q92731 530 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 C11orf52Q96A22 123 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 NABP1Q96AH0 204 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 DTNBP1Q96EV8 351 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 SLC45A3Q96JT2 553 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 PRICKLE1Q96MT3 831 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 AGAP3Q96P47 875 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 CPXM1Q96SM3 734 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 SYT11Q9BT88 431 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 CABLES2Q9BTV7 478 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 MCRIP2Q9BUT9 160 aaKnown RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 PUS3Q9BZE2 481 aaKnown RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 RPAP3Q9H6T3 665 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 THAP10Q9P2Z0 257 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 GHRLQ9UBU3 117 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 RARRES3Q9UL19 164 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 FOXJ3Q9UPW0 622 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 COL24A1Q17RW2 1714 aa3.92□□□□□ -1.78
SRRM1-215ENST00000488317 COL5A2P05997 1499 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-215ENST00000488317 A0A0A6YYD4 124 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 GOLGA6L7A0A1B0GV03 622 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 A8MXK9 166 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 NDUFAB1O14561 156 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 SNAP91O60641 907 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 NDUFA7O95182 113 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 FGFR1OPO95684 399 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 ECDO95905 644 aaPredicted RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 FAM107AO95990 144 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 CCDC172P0C7W6 258 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 HSD17B1P14061 328 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 FOSL2P15408 326 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 CCNE1P24864 410 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 ANXA13P27216 316 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 RDXP35241 583 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 RFC2P35250 354 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 DLSTP36957 453 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 SLC1A4P43007 532 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 HTR5AP47898 357 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 IFNAR2P48551 515 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 TDO2P48775 406 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 FNTAP49354 379 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 MNAT1P51948 309 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 STX17P56962 302 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 PPIAP62937 165 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 IRX1P78414 480 aaPredicted RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 IFFO1Q0D2I5 559 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 TRIP10Q15642 601 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 TMEM41BQ5BJD5 291 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 SLC25A24Q6NUK1 477 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 C8orf74Q6P047 294 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 LRRC8BQ6P9F7 803 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 WDR59Q6PJI9 974 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 APOOLQ6UXV4 268 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 IFT20Q8IY31 132 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 CCDC36Q8IYA8 594 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 OTUD6BQ8N6M0 293 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 OR4F17Q8NGA8 305 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 OR10T2Q8NGX3 314 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 GTF3AQ92664 365 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 LHX4Q969G2 390 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 RAB7BQ96AH8 199 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 POM121L2Q96KW2 1035 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 LINC00479Q96M42 142 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 VPS35Q96QK1 796 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 OR4F4Q96R69 305 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 IWS1Q96ST2 819 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 HSD17B14Q9BPX1 270 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 TRIM51Q9BSJ1 452 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 RBM24Q9BX46 236 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 GPR174Q9BXC1 333 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 VCPKMTQ9H867 229 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 WDR76Q9H967 626 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 COG4Q9H9E3 785 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 TRPV5Q9NQA5 729 aa3.91□□□□□ -1.78
SRRM1-215ENST00000488317 FARSBQ9NSD9 589 aaKnown RBP3.91□□□□□ -1.78
SRRM1-215ENST00000488317 STARD5Q9NSY2 213 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms