RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DSPPQ9NZW4 1301 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 IGLV3-32A0A0A0MS00 114 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 A0A1W2PQD3 144 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ANKUB1A6NFN9 424 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SERINC4A6NH21 518 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CLDN24A6NM45 220 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 HCRTR2O43614 444 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CBX6O95503 412 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 UBL4AP11441 157 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ENDOUP21128 410 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 RPS4Y1P22090 263 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SLC6A2P23975 617 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 AQP1P29972 269 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 PRDX6P30041 224 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CCR4P51679 360 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CRISP3P54108 245 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CDK6Q00534 326 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SCARB2Q14108 478 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF141Q15928 474 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ADRM1Q16186 407 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 WIPI1Q5MNZ9 446 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 FAM91A1Q658Y4 838 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CBLN3Q6UW01 205 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 TRILQ7L0X0 811 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 FGD2Q7Z6J4 655 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 YRDCQ86U90 279 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 LSRQ86X29 649 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 PTOV1Q86YD1 416 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 ZZZ3Q8IYH5 903 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 GALNT11Q8NCW6 608 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 FAM83FQ8NEG4 500 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 OR8J3Q8NGG0 315 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 FBXO27Q8NI29 283 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 WDR60Q8WVS4 1066 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CMTM5Q96DZ9 223 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 OR2B2Q9GZK3 357 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 HOXD1Q9GZZ0 328 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SAP130Q9H0E3 1048 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 KAT8Q9H7Z6 458 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SDHAF3Q9NRP4 125 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 GID8Q9NWU2 228 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 THUMPD1Q9NXG2 353 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 GMPR2Q9P2T1 348 aaKnown RBP10.05□□□□□ -0.8
UBE4B-210ENST00000488228 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 CARD8Q9Y2G2 431 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
UBE4B-210ENST00000488228 PHF3Q92576 2039 aaKnown RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 PCNX1Q96RV3 2341 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 A0A1B0GTH9 108 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 AGAP5A6NIR3 686 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 CCT8L1PA6NM43 557 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 SHISA8B8ZZ34 492 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 IGHG3P01860 377 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 HPNP05981 417 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 GUSBP08236 651 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 UBTFL6P0CB48 400 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 DPP4P27487 766 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 SLC7A2P52569 658 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 SKP2Q13309 424 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 FGFBP1Q14512 234 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF630Q2M218 657 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 DCST1Q5T197 706 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 ARSKQ6UWY0 536 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 BNC2Q6ZN30 1099 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF836Q6ZNA1 936 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 NET1Q7Z628 596 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 VRK2Q86Y07 508 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 MISPQ8IVT2 679 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 OR5M1Q8NGP8 315 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 OR10A6Q8NH74 314 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 OR14L1PQ8NHC6 308 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 C1GALT1C1Q96EU7 318 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 GPATCH1Q9BRR8 931 aaKnown RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 TMEM38AQ9H6F2 299 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 LDAHQ9H6V9 325 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 EXO5Q9H790 373 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 EFCAB1Q9HAE3 211 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 CALML5Q9NZT1 146 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 TAGLN3Q9UI15 199 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 VDAC3Q9Y277 283 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF443Q9Y2A4 671 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 RPH3AQ9Y2J0 694 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-210ENST00000488228 SLC6A5Q9Y345 797 aa10.04□□□□□ -0.8
UBE4B-210ENST00000488228 MYO7BQ6PIF6 2116 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 DOCK7Q96N67 2140 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 C15orf38-AP3S2A0A0A6YYH1 394 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 TRGV5A0A0B4J1U4 118 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 H3BNH8 94 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 J3QKU1 62 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 NME4O00746 187 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 CBR3O75828 277 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 CYP7B1O75881 506 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms