RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SLC13A3Q8WWT9 602 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 PSMG2Q969U7 264 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 TMEM186Q96B77 213 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 NSMCE2Q96MF7 247 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 DBNDD1Q9H9R9 158 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 DCAF13Q9NV06 445 aaKnown RBP2.11□□□□□ -2.07
CCDC66-221ENST00000487739 CNOT2Q9NZN8 540 aaKnown RBP2.11□□□□□ -2.07
CCDC66-221ENST00000487739 IL19Q9UHD0 177 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 PLA2G4CQ9UP65 541 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 L3MBTL1Q9Y468 752 aa2.11□□□□□ -2.07
CCDC66-221ENST00000487739 SPAG9O60271 1321 aaKnown RBP2.11□□□□□ -2.07
CCDC66-221ENST00000487739 COL1A2P08123 1366 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 H0YL77 283 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 BUB1O43683 1085 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 BAG2O95816 211 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 IGFBP1P08833 259 aaPredicted RBP2.1□□□□□ -2.07
CCDC66-221ENST00000487739 CCDC192P0DO97 292 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 TSPAN8P19075 237 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 CCNCP24863 283 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 PRDX2P32119 198 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 PARP6Q2NL67 630 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 CCDC40Q4G0X9 1142 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 ACSF3Q4G176 576 aaPredicted RBP2.1□□□□□ -2.07
CCDC66-221ENST00000487739 LDLRAP1Q5SW96 308 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 IL23RQ5VWK5 629 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 FAM159AQ6UWV7 190 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 ZNF562Q6V9R5 426 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 HACD2Q6Y1H2 254 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 MIER3Q7Z3K6 550 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 P4HA3Q7Z4N8 544 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 GOLGA7Q7Z5G4 137 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 MDS2Q8NDY4 140 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 OR2AP1Q8NGE2 309 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 OR9A1PQ8NGU1 263 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 ART4Q93070 314 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 TADA1Q96BN2 335 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 CARD6Q9BX69 1037 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 TMEM231Q9H6L2 316 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 GDAP2Q9NXN4 497 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 GHRLQ9UBU3 117 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 BCAP29Q9UHQ4 241 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 PHF11Q9UIL8 331 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 GRIN2DO15399 1336 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 METP08581 1390 aa2.1□□□□□ -2.07
CCDC66-221ENST00000487739 SLIT3O75094 1523 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 IGLV4-69A0A075B6H9 119 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 RAMP1O60894 148 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 UFL1O94874 794 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 MT-ATP6P00846 226 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 TGFAP01135 160 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 MAGP20916 626 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 VDAC1P21796 283 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 HTR5AP47898 357 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 GPC3P51654 580 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 SLC26A5P58743 744 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 RPS6P62753 249 aaKnown RBP2.09□□□□□ -2.07
CCDC66-221ENST00000487739 HERVK_113P63132 956 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 ERVK-8P63133 956 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 GABPB1Q06547 395 aaPredicted RBP2.09□□□□□ -2.07
CCDC66-221ENST00000487739 FUT7Q11130 342 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 KARSQ15046 597 aaKnown RBP2.09□□□□□ -2.07
CCDC66-221ENST00000487739 SYPL1Q16563 259 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 SLC39A4Q6P5W5 647 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 CCDC36Q8IYA8 594 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 SAXO1Q8IYX7 474 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 ELMOD2Q8IZ81 293 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 ARL10Q8N8L6 244 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 TMEM80Q96HE8 168 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 ERVK-6Q9BXR3 956 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 NARFLQ9H6Q4 476 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 NANSQ9NR45 359 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 DUS2Q9NX74 493 aaKnown RBP2.09□□□□□ -2.07
CCDC66-221ENST00000487739 P2RX2Q9UBL9 471 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 ZNF225Q9UK10 706 aa2.09□□□□□ -2.07
CCDC66-221ENST00000487739 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.08□□□□□ -2.08
CCDC66-221ENST00000487739 TTC26A0AVF1 554 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 A6NDX4 124 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 TUBAL3A6NHL2 446 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 TMX2-CTNND1H3BSU7 103 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 K7ENP7 123 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 NBR2O15453 112 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 PTBP3O95758 552 aaKnown RBP2.08□□□□□ -2.08
CCDC66-221ENST00000487739 INSP01308 110 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 MMP1P03956 469 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 CD55P08174 381 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 OR8U8P0C7N1 319 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 RALAP11233 206 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 STMN1P16949 149 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 TBPP20226 339 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 PTPN6P29350 595 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 NTSP30990 170 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 RABIFP47224 123 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 NUMBP49757 651 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 STARD6P59095 220 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 MRPS6P82932 125 aaKnown RBP2.08□□□□□ -2.08
CCDC66-221ENST00000487739 ZP4Q12836 540 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 SNX1Q13596 522 aa2.08□□□□□ -2.08
CCDC66-221ENST00000487739 UBE2V2Q15819 145 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms